Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0144 |
Symbol | |
ID | 5359231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 155933 |
End bp | 156652 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640809198 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001345540 |
Protein GI | 152986872 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.47583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCCTGC GCCTGCATGA GGTCGCCCGC AGCCACGGCG CCGGCCGCCA GCGCTACCGC CTGCGGGTGC CGGCGCTGGA ATTGCGCGCG GGTCGCCAAC TGGCCATCGT CGGCCCCAGC GGCTGCGGCA AGAGCACCCT GCTCGACCTG CTGGCGCTGG CCCTGGCGCC GGACCCGGGC GGGCGCTTCG AATTCCTCGC CGGGGAGCGC CCCCAGGACA TCGCCGCGCT CTGGCGCGAC GGCCGCCAGG ACCGCTTGGC GACGCTGCGC CGGCAGCACT GCGGCTACGT CCTGCAAAGC GGCGGGTTGC TCGAGTTCCT CGATGTGCGG CGCAACATCG GACTGCCCTG CGCGTTGCTC GGCGCCCCGT CCGCCGAGCG CGTGCAGACG CTGGCCGAGC GACTGGAAAT CGGCGACCAG CTGGACAAGA AACCGGCGGC GCTGTCGGTC GGCCAGCGCC AGCGGGTCGC CATCGCCCGC GCCCTGGTGC ATGCGCCGCG CCTGTTGCTG GCCGACGAAC CGACCGCGGC GCTCGACCCG CTGAACGCCG AACGGGTGAT GCGCCTGCTG GTGGAGCAGG CCCGCGAGCG CGGCGCCTGC ACCGTGGTCG CCACCCACGA CGAGCGCCTG GCCCGCGCCG CCGGCCTGGA GGTCCTGGCC ATCCGCTGGC AACGCGAGGC CGACGACAGC GTCGGCGCCT GCCTCGAGGA TGCCGGCTGA
|
Protein sequence | MILRLHEVAR SHGAGRQRYR LRVPALELRA GRQLAIVGPS GCGKSTLLDL LALALAPDPG GRFEFLAGER PQDIAALWRD GRQDRLATLR RQHCGYVLQS GGLLEFLDVR RNIGLPCALL GAPSAERVQT LAERLEIGDQ LDKKPAALSV GQRQRVAIAR ALVHAPRLLL ADEPTAALDP LNAERVMRLL VEQARERGAC TVVATHDERL ARAAGLEVLA IRWQREADDS VGACLEDAG
|
| |