Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0042 |
Symbol | |
ID | 5358747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 40918 |
End bp | 42606 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640809096 |
Product | hypothetical protein |
Protein accession | YP_001345438 |
Protein GI | 152988960 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTATCC CTCGCCTGGC CCTTGTCCTC CTGTGCCTGC CGCTCATGGC CAGCGCCGCC CCCTTCACCT CTCCCGGCGA CCGCGACCTG ATCCGCGAGC GCCAGCAGCG CCTGCTGGAC GAGCAGCGCA AGCGCCTGGA GGAACTCCAG CAACTGCCAG GTAACGAAGC GCCCTCGACG CCAGGCGGAT CCGCTGGCGA CGGCCGTTGT TTCGACATCC GTCGCATCGA GCTCGAAGGC GCCGAGCACC TGGCGCAGGG CGCCCGCGAC GAATTGCTGG CCCCCTACCA GGGCAAATGC CTGGGCGTGG GCCAGCTCAA CGCGTTGCTC AAGGCCGTCA CCGACCATTA CCTGGATCGA GGCTACGTCA CCACCCGTGC CTACCTGCCG CAGCAGGACC TGGCCTCCGG GACGCTGCGG GTGATCGTCG TCGAAGGCCG CCTGGAAGGT CTCGACAGCT CCGCGCTGGC CAGCCCGCGC GAGCTGGCGA TGAGTTTTCC CGGCAAGACC GGCGAACTGC TCGACCTGCG TGAGTTGGAG CAACTGGTCG ACCAGCTGGG CCGCCTGCCC TCGCGCCAGG CGCAGCTGGA GCTGGTGCCC GGCAGCCAGG TCGGCGGCAG CCGGGTGCGT CTCAAGGGCG AGCGCGACAA GCCCTGGCGC GTCTCCGCCA CGCGCAACAA CGACGGCGAC GTGAGCACCG GCGAGCAGCA GATGGGCCTC GGCCTGGACT GGGACAGCCC GCTGGGCCTG GCCGACCAGC TCAGCCTGCG CGCCAACCAG GACGCGGTGA GCGACCGCTG GCGCCATTCC GACAGCCAGA GCCTGTTCTA CAGCCTGCCC TGGGGGTGGT GGACCTTCAC CTACGGCTAC AGCCAGAGCG ACTACCGCAC GCGCAACGAG ACCAGCGGCT TCCCCTTCAA GCTCGACGGC GACAGCCGCA GCCACCAGTT CCGCGCCGAA CGCGTGCTGC ACCGCGACGG CGTGAGCAAG ACCGCCATGA GCCTGGGGCT CAGCCACCAG CGCACCAACA ACTATATCGA AGACACCCGC CTGGAAGACC AGAGCACACG GATCACCGAG ACCCAGCTCG GCTTCAACCA TGGCCGGCGG ATCGGCAGCG GCTTCGTCAA CCTCGACCTC GGCTGGCAGC AGGGCATCGG CGCCCTTGGC GCGCAGGGTC GCGGCCAGCC GCGGGGCGGC GATGCGCATG CGCGCTACGA CAAGTACAGC CTGACCCTCA GCTACCTGCA GCCGTTCCAG CTGTGGGGCG AGCGCTTCAG CTTCGACAGC CTGGCCACCG GGCAGAGGAG CGAGGACGTG CTGTTCAGCC CGCAGCGCAT CAGCCTCGGC GGCAACAGCT CGGTGCGCGG CTTCAAGGAC CAGACCCTGA CCGGCGACAG CGGTGGCTAC TGGCGCAACC AGTTGCGCTG GCGGCGCGCG GTGCAGTGGG CGCCGCTGCG GCCCTGGCTG CAGGAATACG GCGTGGCCTT CGCCTACGAC GTCGGCGTGA TCCGCCACGA CCGCTACAAC GACGGCGCCA GCGGGCGCAT GAGTGGCAAC GCCATCGAAC TGGATGCCCG CGGCCGCTAT TTCGCCGCCA GCGTCGGCTT CGCCCGCTCG CTGGAGCGGC CGAGCGTCAT CGAGCGGCGC GAGCACCCGA TCTATTTCCG GGTCGACGCG TTCTTCTGA
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Protein sequence | MAIPRLALVL LCLPLMASAA PFTSPGDRDL IRERQQRLLD EQRKRLEELQ QLPGNEAPST PGGSAGDGRC FDIRRIELEG AEHLAQGARD ELLAPYQGKC LGVGQLNALL KAVTDHYLDR GYVTTRAYLP QQDLASGTLR VIVVEGRLEG LDSSALASPR ELAMSFPGKT GELLDLRELE QLVDQLGRLP SRQAQLELVP GSQVGGSRVR LKGERDKPWR VSATRNNDGD VSTGEQQMGL GLDWDSPLGL ADQLSLRANQ DAVSDRWRHS DSQSLFYSLP WGWWTFTYGY SQSDYRTRNE TSGFPFKLDG DSRSHQFRAE RVLHRDGVSK TAMSLGLSHQ RTNNYIEDTR LEDQSTRITE TQLGFNHGRR IGSGFVNLDL GWQQGIGALG AQGRGQPRGG DAHARYDKYS LTLSYLQPFQ LWGERFSFDS LATGQRSEDV LFSPQRISLG GNSSVRGFKD QTLTGDSGGY WRNQLRWRRA VQWAPLRPWL QEYGVAFAYD VGVIRHDRYN DGASGRMSGN AIELDARGRY FAASVGFARS LERPSVIERR EHPIYFRVDA FF
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