| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0038 |
|---|
| Symbol | trpB |
|---|
| ID | 5358013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 37770 |
|---|
| End bp | 38978 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640809092 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001345434 |
|---|
| Protein GI | 152988472 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.206234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCT ATCGCAACGG CCCCGACGCC AAGGGCCTGT TCGGCCGCTT CGGCGGCCAG
TACGTCGCCG AGACCCTGAT GCCGCTGATC CTCGACCTGG CCCGCGAATA CGAGAAGGCC
AAGGACGACC CGGCGTTCCA GGAGGAACTG GCCTACTTCC AGCGCGACTA TGTCGGCCGG
CCGAGCCCGC TGTACTTCGC CGAGCGCCTG ACCGAGCACT GCGGCGGGGC GAAGATCTAC
CTCAAGCGCG AGGAGCTGAA CCACACCGGC GCGCACAAGA TCAACAACTG CATCGGCCAG
ATCCTCCTGG CCCGGCGCAT GGGCAAGAAG CGCATCATCG CCGAGACCGG CGCCGGCATG
CACGGCGTGG CCACCGCCAC GGTGGCCGCG CGCTTCGGCC TGCAGTGCGT GATCTACATG
GGTACCACCG ACATCGACCG GCAGCAGGCC AACGTGTTCC GCATGAAGCT GCTGGGCGCC
GAGGTGATCC CGGTGACCGC CGGCACCGGC ACCCTGAAGG ACGCCATGAA CGAAGCGCTG
CGCGACTGGG TGACCAATGT CGACAGCACT TTCTACCTGA TCGGCACGGT CGCCGGCCCG
CATCCGTACC CGGCGATGGT CCGCGACTTC CAGGCGGTGA TCGGCAAGGA GACCCGCGAA
CAGCTGGCCG AGAAGGAAGG GCGCCTACCC GACTCGCTAG TCGCCTGCAT CGGCGGCGGC
TCCAACGCCA TGGGCCTGTT CCATCCGTTC CTCGACGACG CCGGTGTGCG GATCGTCGGC
GTGGAGGCCG CCGGCCACGG CATCGATACC GGCAAGCACG CGGCCAGCCT GAACGGCGGC
GTGCCCGGCG TGCTGCACGG CAACCGCACC TTCCTGCTGC AGGACGCGGA CGGCCAGATC
ATCGACGCGC ACTCCATCTC CGCCGGCCTC GACTACCCCG GCATCGGCCC CGAACACGCC
TGGCTGCACG ACGTCGGTCG GGTCGAATAC ACCTCGATCA CCGACGACGA GGCGCTGGAC
GCCTTCCACA CCTGCTGCCG CCTCGAAGGC ATCATCCCGG CGCTGGAGAG TTCCCACGCC
CTGGCCGAGG CGTTCAAGCG CGCCCCCGGC CTGCCCGGGG ACCACATCAT GGTGGTGAAC
CTGTCCGGTC GCGGCGACAA GGACATGCAG ACCGTCATGC ACCACATGCA ACAGGAGCAC
AAAGCATGA
|
|---|
| Protein sequence | MTAYRNGPDA KGLFGRFGGQ YVAETLMPLI LDLAREYEKA KDDPAFQEEL AYFQRDYVGR
PSPLYFAERL TEHCGGAKIY LKREELNHTG AHKINNCIGQ ILLARRMGKK RIIAETGAGM
HGVATATVAA RFGLQCVIYM GTTDIDRQQA NVFRMKLLGA EVIPVTAGTG TLKDAMNEAL
RDWVTNVDST FYLIGTVAGP HPYPAMVRDF QAVIGKETRE QLAEKEGRLP DSLVACIGGG
SNAMGLFHPF LDDAGVRIVG VEAAGHGIDT GKHAASLNGG VPGVLHGNRT FLLQDADGQI
IDAHSISAGL DYPGIGPEHA WLHDVGRVEY TSITDDEALD AFHTCCRLEG IIPALESSHA
LAEAFKRAPG LPGDHIMVVN LSGRGDKDMQ TVMHHMQQEH KA
|
|---|
| |