Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_0017 |
Symbol | trkA |
ID | 5354401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 17245 |
End bp | 18618 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640809071 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_001345413 |
Protein GI | 152988900 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.290257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATCA TCATCCTCGG TGCCGGCCAG GTCGGCGGCA CACTGGCCGA GCACCTTGCC AGCGAAGCCA ACGACATTAC CGTGGTCGAC ACCGACGGCG ATCGCCTGCG CGACCTCGGC GACCGCCTCG ACATCCGCAC CGTGCAAGGC AAGGCCTCGT TCCCCACGGT GCTGCGCCAG GCCGGCGCCG ACGACGCCGA CATGCTGGTG GCGGTGACCA ACAGCGACGA GACCAACATG GTCGCCTGCC AGGTCGCCTA CACCCTGTTC AACACCCCGA CCAAGATCGC CCGCGTCCGC GAACCGGCCT ACCTGACCCG TACCGGCCTG TTCGACAACG ATGCGATCCC GGTGGACGTG CTGATCAGCC CGGAGCAGGT GGTCACCAAC TACATCAAGC GCCTGATCGA GCATCCGGGC GCGCTGCAGG TGATCGACTT CGCCGAGGGC AAGGCCCAGC TGGTAGGCAT CAAGGCCTAC TACGGCGGCC CGCTGGTGGG GCAGGAACTG CGCCAGCTGC GCGAGCACAT GCCGAACGTG GACACCCGCG TCGCCGCGAT CTACCGCCGC AACCGGCCGA TCATTCCCCA GGGCGACACG GTGATCGAGG CCGACGACGA GGTCTTCTTC ATCGCCGCCA AGGCCCACAT CCGCGCGGTG ATGGGCGAGA TGCGCCGACT CGACGACAGC TACAAGCGGA TCATCATCGC CGGTGGCGGC AACGTCGGCG AACGCCTGGC CGAAGCCATC GAGAGCCGCT ACCAGGTGAA GATCATCGAA CGCAGCCCGC TGCGCTGCCG GCACCTGTCA GACACCCTCG ACAGCACCAT CGTGCTCAAC GGCAGCGCAT CCGACCGCGA CCTGCTGCTG GAGGAGAACA TCGGCGAGAC CGACGTATTC CTCGCCCTGA CCAACGACGA CGAGGCCAAC ATCATGTCCT CGCTGCTGGC CAAGCGGCTC GGCGCGAGCA AGGTGATGAC CCTGATCAAC AACCCGGCCT ACGTCGACCT GGTGCAGGGC GGCGAGATCG ACATCGCCAT CAGCCCGCAA CTGGCGACCA TCGGTACCCT GCTGGCGCAC GTCCGCCGCG GAGACATCGA GAGCGTGCAT TCGCTGCGCC GTGGCGCGGC CGAGGCCATC GAAGTGGTGG CCCATGGCGA CGCCAAGTCG AGCAAGGTGA TCGGCCGCTC GATCAACGAG ATCAAGCTAC CGCCGGGCAC CACCATCGGT GCCCTGGTGC GCGACGAGGA AGTGCTGATC GCCCACGGCG ACACGCGCAT CGAGAGTGAC GACCATGTGC TGCTGTTCCT GGTCGACAAG AAGTACATCC GCGATGTCGA ACGGCTGTTC CAGGCCGGCC TGACGTTCTT CTGA
|
Protein sequence | MKIIILGAGQ VGGTLAEHLA SEANDITVVD TDGDRLRDLG DRLDIRTVQG KASFPTVLRQ AGADDADMLV AVTNSDETNM VACQVAYTLF NTPTKIARVR EPAYLTRTGL FDNDAIPVDV LISPEQVVTN YIKRLIEHPG ALQVIDFAEG KAQLVGIKAY YGGPLVGQEL RQLREHMPNV DTRVAAIYRR NRPIIPQGDT VIEADDEVFF IAAKAHIRAV MGEMRRLDDS YKRIIIAGGG NVGERLAEAI ESRYQVKIIE RSPLRCRHLS DTLDSTIVLN GSASDRDLLL EENIGETDVF LALTNDDEAN IMSSLLAKRL GASKVMTLIN NPAYVDLVQG GEIDIAISPQ LATIGTLLAH VRRGDIESVH SLRRGAAEAI EVVAHGDAKS SKVIGRSINE IKLPPGTTIG ALVRDEEVLI AHGDTRIESD DHVLLFLVDK KYIRDVERLF QAGLTFF
|
| |