Gene Mmwyl1_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_4484 
SymboltrmE 
ID5365798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp5096287 
End bp5097666 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content50% 
IMG OID640806890 
ProducttRNA modification GTPase TrmE 
Protein accessionYP_001343314 
Protein GI152998479 
COG category[R] General function prediction only 
COG ID[COG0486] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000179125 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGATT TCCAATACGC CACAGACCAA GACACGATTG CCGCCCAAGC CACCGCTCCT 
GGCCGAGGAG GCGTAGGGAT CATTCGTTTA TCAGGCCCTA AAAGCCTTGC CATTGCGAAG
CAGATCATCG GCTTTGAGCC CAAACCTCGT TATGCCCATT ACGTGCCTTT CAAAACGACA
GGTCAAGAAC AACTCGACGA AGGCATCGCC TTGTATTTTC CCGGGCCAAA TTCCTTTACT
GGTGAAGATG TTTTTGAGTT ACAAGGCCAC GGCGGTCCCG TTATTATGGA CATGCTACTG
AGCCATTGCG TAGCGCTTGG GGCACGTTTA GCTCGTCCAG GCGAGTTTTC TGAACGTGCA
TTCATGAACG ACAAAATGGA CTTAACTCAA GCGGAAGCCA TTGCCGATTT GATCGACAGT
ACTTCTGAGC AGGCCGCTAA ATGCGCATTG CGATCTCTGC AAGGCGCTTT CTCAAAACGC
GTTGATGAGT TAGTCGAAGC CTTGATTCAT CTGCGTATTT ACGTGGAAGC CGCGATTGAT
TTTCCAGAAG AGGAAATCGA CTTCATTGGC GACGGTAAAG TCGCTGCGGA ACTGGCTGGC
ATTCAAGCGA AACTAGCAGA AGTCCTCAAA GAAGCGAACC AAGGCGCCTT GATTCGCGAA
GGCATGAATG TGGTGATAGC AGGTCGTCCA AATGCCGGCA AATCCAGCTT GTTAAACGCA
CTATCAGGGA AAGAGTCCGC TATTGTCACC AACATAGAAG GCACGACTCG AGACGTGTTG
CGCGAGCATA TCCACCTTGA CGGCATGCCG CTACACATTA TCGACACAGC TGGTTTGCGT
GATAGCCCTG ACGAAGTAGA GCGCATTGGT ATTCAACGCG CATGGGACGA AATCAGCAAA
GCAGATCGCA TTCTCATGAT GGTCGACAGC CAATCCATTG ATTCAAAAGA TCCTAATGAG
ATTTGGCCAG AGTTTATGGA AAAGCTTGGC GACACTAAAC ACCTGACTTT GGTACGTAAC
AAAGTTGACT TAACCAAAGA AGGCACTGGA ATAGAAACTG TCTCAGGCGT TCCTGTAGTG
TCTCTATCGG CAAAAACAGG TGAGGGCGTT ACTGATTTAA CTGAACATCT AAAAGCCGTC
ATGGGCTTCG ACAGCACGAC TGAAGGGGGC TTTATCGCTC GCCGTCGCCA TATCGAAGCA
CTTAACAAAG CCAATCGCTT CTTAGATGCT GGAAACGAGC AACTACACGG CTATGGCGCA
GGGGAATTAC TCGCTGAAGA TCTCAAAGAA GCCCAACAAG CCCTAAGCGA AATCACCGGC
GCCTTCACCA GCGACGACTT GCTAGGGCGC ATCTTCGGCT CGTTTTGTAT TGGTAAATAA
 
Protein sequence
MTDFQYATDQ DTIAAQATAP GRGGVGIIRL SGPKSLAIAK QIIGFEPKPR YAHYVPFKTT 
GQEQLDEGIA LYFPGPNSFT GEDVFELQGH GGPVIMDMLL SHCVALGARL ARPGEFSERA
FMNDKMDLTQ AEAIADLIDS TSEQAAKCAL RSLQGAFSKR VDELVEALIH LRIYVEAAID
FPEEEIDFIG DGKVAAELAG IQAKLAEVLK EANQGALIRE GMNVVIAGRP NAGKSSLLNA
LSGKESAIVT NIEGTTRDVL REHIHLDGMP LHIIDTAGLR DSPDEVERIG IQRAWDEISK
ADRILMMVDS QSIDSKDPNE IWPEFMEKLG DTKHLTLVRN KVDLTKEGTG IETVSGVPVV
SLSAKTGEGV TDLTEHLKAV MGFDSTTEGG FIARRRHIEA LNKANRFLDA GNEQLHGYGA
GELLAEDLKE AQQALSEITG AFTSDDLLGR IFGSFCIGK