Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4484 |
Symbol | trmE |
ID | 5365798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 5096287 |
End bp | 5097666 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640806890 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_001343314 |
Protein GI | 152998479 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000179125 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGATT TCCAATACGC CACAGACCAA GACACGATTG CCGCCCAAGC CACCGCTCCT GGCCGAGGAG GCGTAGGGAT CATTCGTTTA TCAGGCCCTA AAAGCCTTGC CATTGCGAAG CAGATCATCG GCTTTGAGCC CAAACCTCGT TATGCCCATT ACGTGCCTTT CAAAACGACA GGTCAAGAAC AACTCGACGA AGGCATCGCC TTGTATTTTC CCGGGCCAAA TTCCTTTACT GGTGAAGATG TTTTTGAGTT ACAAGGCCAC GGCGGTCCCG TTATTATGGA CATGCTACTG AGCCATTGCG TAGCGCTTGG GGCACGTTTA GCTCGTCCAG GCGAGTTTTC TGAACGTGCA TTCATGAACG ACAAAATGGA CTTAACTCAA GCGGAAGCCA TTGCCGATTT GATCGACAGT ACTTCTGAGC AGGCCGCTAA ATGCGCATTG CGATCTCTGC AAGGCGCTTT CTCAAAACGC GTTGATGAGT TAGTCGAAGC CTTGATTCAT CTGCGTATTT ACGTGGAAGC CGCGATTGAT TTTCCAGAAG AGGAAATCGA CTTCATTGGC GACGGTAAAG TCGCTGCGGA ACTGGCTGGC ATTCAAGCGA AACTAGCAGA AGTCCTCAAA GAAGCGAACC AAGGCGCCTT GATTCGCGAA GGCATGAATG TGGTGATAGC AGGTCGTCCA AATGCCGGCA AATCCAGCTT GTTAAACGCA CTATCAGGGA AAGAGTCCGC TATTGTCACC AACATAGAAG GCACGACTCG AGACGTGTTG CGCGAGCATA TCCACCTTGA CGGCATGCCG CTACACATTA TCGACACAGC TGGTTTGCGT GATAGCCCTG ACGAAGTAGA GCGCATTGGT ATTCAACGCG CATGGGACGA AATCAGCAAA GCAGATCGCA TTCTCATGAT GGTCGACAGC CAATCCATTG ATTCAAAAGA TCCTAATGAG ATTTGGCCAG AGTTTATGGA AAAGCTTGGC GACACTAAAC ACCTGACTTT GGTACGTAAC AAAGTTGACT TAACCAAAGA AGGCACTGGA ATAGAAACTG TCTCAGGCGT TCCTGTAGTG TCTCTATCGG CAAAAACAGG TGAGGGCGTT ACTGATTTAA CTGAACATCT AAAAGCCGTC ATGGGCTTCG ACAGCACGAC TGAAGGGGGC TTTATCGCTC GCCGTCGCCA TATCGAAGCA CTTAACAAAG CCAATCGCTT CTTAGATGCT GGAAACGAGC AACTACACGG CTATGGCGCA GGGGAATTAC TCGCTGAAGA TCTCAAAGAA GCCCAACAAG CCCTAAGCGA AATCACCGGC GCCTTCACCA GCGACGACTT GCTAGGGCGC ATCTTCGGCT CGTTTTGTAT TGGTAAATAA
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Protein sequence | MTDFQYATDQ DTIAAQATAP GRGGVGIIRL SGPKSLAIAK QIIGFEPKPR YAHYVPFKTT GQEQLDEGIA LYFPGPNSFT GEDVFELQGH GGPVIMDMLL SHCVALGARL ARPGEFSERA FMNDKMDLTQ AEAIADLIDS TSEQAAKCAL RSLQGAFSKR VDELVEALIH LRIYVEAAID FPEEEIDFIG DGKVAAELAG IQAKLAEVLK EANQGALIRE GMNVVIAGRP NAGKSSLLNA LSGKESAIVT NIEGTTRDVL REHIHLDGMP LHIIDTAGLR DSPDEVERIG IQRAWDEISK ADRILMMVDS QSIDSKDPNE IWPEFMEKLG DTKHLTLVRN KVDLTKEGTG IETVSGVPVV SLSAKTGEGV TDLTEHLKAV MGFDSTTEGG FIARRRHIEA LNKANRFLDA GNEQLHGYGA GELLAEDLKE AQQALSEITG AFTSDDLLGR IFGSFCIGK
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