Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_4440 |
Symbol | |
ID | 5368693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 5047768 |
End bp | 5048877 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640806846 |
Product | TRAP dicarboxylate transporter- DctP subunit |
Protein accession | YP_001343270 |
Protein GI | 152998435 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.270003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAA TAAGAATATG GGCAAAAGTA GCACTGGTCG GTGTAATAAC AGCTACTTTG GTTGCCTGTG GTGGATCTGA AGAAAAAGAA ACCGCAAAGG TAGAACAAAA AGTTGATGTC ATTCATTGGA AAATGGTAAC AACTTGGCCG AAAAATACTC CTGGAATGGG CACAGGTGCA CAAGCGCTGG CAGATAATAT CAAAGAAATG TCTAACGGCC GTTTGGATAT TAAAGTCTAT GCTGCAGGTG AACTTGTTCC AGCATTAGAG GTATTTGATG CGGTATCTCG TGGCACAGCG CAAATGGGCC ACGGCACTGC GTATTACTGG AAAGGAAAAG TGCCAGCAGC GCAGTTTTTC TCTACGGTTC CTTTTGGTTT TAACGCGCAA GAATTTAACT CTTGGATTGC CTATGGCGGT GGTTTACAGC TGTGGGAAGA AATCTACGCT CCGTTTAACT TAATTCCTAT GGTAGCTGGT AATGCTGGCG TGCAAATGGG CGGTTGGTTT AATAAAGAGA TTAATTCGTT AGCCGATTTC CAAGGCTTGA AAATGCGTAT GCCAGGGTTA GGTGGAGAGG TACTGAAAAA AGTCGGTGCA TCGCCTATTA CTTTACCTGC TAGCGAAGTT TTCACCGCGC TTCAAACTGG GACAATCGAT GCTACAGAAT GGGTTGGGCC TTATAATGAT CTTGCGTTTG GTTTGTATAA AGCGGCGAAA TATTACTATT ATCCAGGCTG GCATGAGCCA GGTTCTGCTG TTGAAGCTAT CTTTAATAAA GACGCTTTTG AAGCTTTGCC AAAAGACTTA AAAGCCATTG TGCGCTCTGC GGTTCAACAA GCTAACTTAG ACATGATCAA CGAGTTTACT GCGCTTAATA ATGCTGCGCT GCAAACCTTG GTAAATGAGC ATCATGTGAT TCTTAAGCCT TTCCCTCGAG ACTTGTTGGA AGCACTTAAG AAAGCGTCTA CAGAGACTCT AGAAGAAGTG GCTGCGAATG ATCCTGAGAG CCAAAAAGTC TATGATTCTT TCAAGAGCTT TTTAGCACCT GTGAGTGAGT GGCATGATAT TTCTGAGCGC GCTTATATTA ATGCACGCGC AGACGATTAA
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Protein sequence | MSKIRIWAKV ALVGVITATL VACGGSEEKE TAKVEQKVDV IHWKMVTTWP KNTPGMGTGA QALADNIKEM SNGRLDIKVY AAGELVPALE VFDAVSRGTA QMGHGTAYYW KGKVPAAQFF STVPFGFNAQ EFNSWIAYGG GLQLWEEIYA PFNLIPMVAG NAGVQMGGWF NKEINSLADF QGLKMRMPGL GGEVLKKVGA SPITLPASEV FTALQTGTID ATEWVGPYND LAFGLYKAAK YYYYPGWHEP GSAVEAIFNK DAFEALPKDL KAIVRSAVQQ ANLDMINEFT ALNNAALQTL VNEHHVILKP FPRDLLEALK KASTETLEEV AANDPESQKV YDSFKSFLAP VSEWHDISER AYINARADD
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