| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_4044 |
|---|
| Symbol | dddC |
|---|
| ID | 5368768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4572170 |
|---|
| End bp | 4573666 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640806437 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001342875 |
|---|
| Protein GI | 152998040 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAG TTGGACAGTT AATTAATGGT GAAATCATTA TTGAAGGTAC ACGTCTGCAA
GACATCTTCA ATCCTTCTAC TGGCGAAGTA AGTAAACAAG TTGATTTGGC GTCTAAAAAA
ACCGTTGAAG AAGCTATTGC CGTTGCCCAA GCAGCCTATC CAGCATGGCG CAATACCCCA
GCGATTAAAC GTGCTCGCAT CATGTTTAAC TTCAAAACGC TGTTAGAAAA ACACGCTGAC
ACCATCTGCA AAATGATTGG TGAAGAACAC GGTAAAATTA GTCATGATGC TGCAGGTGAG
CTACAGCGTG GTATTGAAAA CGTAGAATAC GCATGTGGTG CGCCAGAACT GCTAAAAGGC
GAGCACAGTA AAAATGTTGG TCCGAATATC GACTCTTGGA GTGAATTCCA GCCTCTTGGT
GTTGTTGCGG GCATCACGCC ATTTAACTTC CCAGCTATGG TGCCTCTGTG GATGTTCCCA
ATGGCGTTGG TATGTGGCAA CTGCTTTATT CTTAAGCCTT CTGAGCGTGA CCCAAGCTCT
ACTTTATTTA TCGCGCAACT ATTAAAAGAA GCAGGACTTC CAGACGGCGT CATGAATGTG
GTGAACGGTG ACAAAGAAGC CGTTGATACA CTATTGAATG ATGACCGCAT TAAAGCTGTT
AGCTTTGTAG GTTCCACGCC AATTGCGGAA TACATTTACA CCACAGCGAA CGCCAATGGT
AAGCGTTGCC AAGCCCTAGG CGGAGCAAAA AACCACGCCA TAGTTATGCC TGATGCGGAT
ATGGACAATG CCGTCAATCA ATTAGTTGGC GCGGCATTTG GTTCCTCTGG TGAACGCTGT
ATGGCACTTT CTGTAGCCGT GACCGTTGGC GATGCCGCTG GTGATGCACT TGCCGAGAAG
ATGCAAGCCG CTATGCAATC GCTAAATGTG GGCCCTTACT CTGATGCGAA CAATGACTTT
GGTCCTGTTA TCACCAAAGC ACATCAGGAA AAAGTTATTG GCTACATTAA TAGCGCAGAA
CAGCAAGGTG CAAAAATCGT CGTTGACGGG CGCAACGTAA AAATCAAAGG TCATGAAAAT
GGTTTCTATG TTGGCGCAAC GCTAATCGAC AATGTTCGCT CTGATATGGT TAGCTACAAA
GAAGAGATTT TTGGTCCTGT TCTGCAAATC GTTCGAGTGA AAACAATGCA AGAAGCCATG
GATCTGATTG ATGCTCACGA GTACGGTAAC GGTACTTGTA TCTTCACTCG TGATGGCGAA
GCAGCGCGTT ACTTCTCTGA TAACATTCAA GTGGGCATGG TCGGTATAAA CGTTCCACTT
CCTGTTCCAG TGGCTTACCA CAGTTTTGGT GGCTGGAAGC GCTCACTATT CGGTGACCTA
CACGCTTATG GTCCTGATGC GGTTCGTTTT TACACCAAAC GTAAAACAGT AACTCAGCGC
TGGCCTTCTG CGGGCGTTCG AGAAGGCGTT GAGTTTTCTA TGCCAACTAT GAAGTAG
|
|---|
| Protein sequence | MSTVGQLING EIIIEGTRLQ DIFNPSTGEV SKQVDLASKK TVEEAIAVAQ AAYPAWRNTP
AIKRARIMFN FKTLLEKHAD TICKMIGEEH GKISHDAAGE LQRGIENVEY ACGAPELLKG
EHSKNVGPNI DSWSEFQPLG VVAGITPFNF PAMVPLWMFP MALVCGNCFI LKPSERDPSS
TLFIAQLLKE AGLPDGVMNV VNGDKEAVDT LLNDDRIKAV SFVGSTPIAE YIYTTANANG
KRCQALGGAK NHAIVMPDAD MDNAVNQLVG AAFGSSGERC MALSVAVTVG DAAGDALAEK
MQAAMQSLNV GPYSDANNDF GPVITKAHQE KVIGYINSAE QQGAKIVVDG RNVKIKGHEN
GFYVGATLID NVRSDMVSYK EEIFGPVLQI VRVKTMQEAM DLIDAHEYGN GTCIFTRDGE
AARYFSDNIQ VGMVGINVPL PVPVAYHSFG GWKRSLFGDL HAYGPDAVRF YTKRKTVTQR
WPSAGVREGV EFSMPTMK
|
|---|
| |