| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3957 |
|---|
| Symbol | |
|---|
| ID | 5367797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 4463599 |
|---|
| End bp | 4464543 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640806345 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001342789 |
|---|
| Protein GI | 152997954 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCTG TTCCTTTAGC TGGACTGGGT ACATTTGCTA TCGCGGCTCG TCATTTGAGT
TTCACTAAAG CCGCGCAAGA ACTGCACCTT ACACAGGGGG CCGTGAGCCA GCAAATTCGT
CAGTTAGAAG AGCGTTTAAA ACTTACTTTG TTTGTTCGTT ATCATCGACG TCTAGAGCTG
ACCGTGGCTG GTGTGCGTTT GGCTGTGCAA TTGAATCATA GCTTTACTGA AATTAATGAT
TTGGTTTTAG AATTACAGGA AGAAGAAACA TCTAATATTT TGACGGTTTC TGTTATGCCG
TCCTTTGCAA CTAAGTGGTT GATTCCTCGG TTGGGTAGTT TGCAAGAAGC CTATCCTGAT
TTACAGCTTC GCATTCAGGC CAACGATAGA GAGGTGAATT TCCAGCGTGA CAGGATTGAT
GTAGCGATAG TACACAGCCA TGTGCATAGT TCAAAAGGGC ATATTGTTCC ATTAATGAAA
GACAAAGTGT TTCCGGTTTG TAGTCCTGCG TTTGCAGAAC AGCGAGCTTT GACTGAAGCT
AGCCAGTTAG CGCAAGTGCC TTTATTAAAT GATGACTCTG AGTGGCGTTT TTCTAGTCCA
TATGCGGAGT GGGAGAAGTG GCTGTTATTG GCTAATGCAA AAGGCATTAA GCCTTCGCGC
GGCATCAGTT TTAACCGTGG TGATCTTGCT GTGCAAGCAG CGGTTGCTGG ACAAGGCGTT
GCTTTAGGGA GAACGCCTTT GGTGATGGAT GATATTCAGC AGGGAAGATT GATGATGCCG
TTTTCAGAAA CATTAGATGA AGGCCATGCT TATCTTTTTG TTTGTCCCGA AATGCAGCGT
CAGCGAGAGC CGGTTCAGCA GTTACTCAGT TGGTTAGTCG CGCAATGCTA CGAATATTCA
CCAGAGGATG CTTTGACGAC GCCCGATGAT TTGATTTCGT TGTAA
|
|---|
| Protein sequence | MKSVPLAGLG TFAIAARHLS FTKAAQELHL TQGAVSQQIR QLEERLKLTL FVRYHRRLEL
TVAGVRLAVQ LNHSFTEIND LVLELQEEET SNILTVSVMP SFATKWLIPR LGSLQEAYPD
LQLRIQANDR EVNFQRDRID VAIVHSHVHS SKGHIVPLMK DKVFPVCSPA FAEQRALTEA
SQLAQVPLLN DDSEWRFSSP YAEWEKWLLL ANAKGIKPSR GISFNRGDLA VQAAVAGQGV
ALGRTPLVMD DIQQGRLMMP FSETLDEGHA YLFVCPEMQR QREPVQQLLS WLVAQCYEYS
PEDALTTPDD LISL
|
|---|
| |