| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3793 |
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| Symbol | tdh |
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| ID | 5365579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 4270784 |
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| End bp | 4271809 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640806183 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001342627 |
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| Protein GI | 152997792 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00257874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACGC TTGCGAAACT TCACGCCGAA AAAGGCATTT GGATGACCGA TGTCCCACAT
CCAGATTGTG GTCACAATGA TGTCGTTATC AAAATAAGTA AAACCGCCAT CTGCGGCACA
GACATGCACA TTTATCAGTG GGACGATTGG GCGCAAAACA CCATTCCAGT ACCGATGACT
GTTGGTCATG AGTTTGTTGG AGTGATCACA GAAGTAGGCC CAGAAGTATC AGGCTTTAAG
ATTGGTGATC GCGTTTCTGG TGAAGGCCAC ATTACTTGCG GCCATTGCCG TAACTGTCGT
GCGGGTCGTC GTCACCTATG CCGAAAAACC CTCGGCGTTG GTGTAAACCG CACCGGTGCT
TTTGCCGAGT ATTTGGTTAT TCCTGCAAGT AACGCATTTA AGATTCCCAA TAATATCAGT
GACGACATGG CCGCGATATT CGATCCATTT GGTAACGCGA CCCATACCGC CCTATCGTTT
GATTTGATCG GTGAAGACGT TTTAATCACA GGAGCAGGAC CGATTGGTGC TATGGCAGCA
GCTATTGCTA AACACGTGGG CGCTCGTAAT GTCGTGATTA CGGATGTGAA CGACTTCCGT
CTAGATTTAG CGAAAAAGAT GGGCGCAACA CGTACAGTCA ACGTTAGCCG TGAGTCATTA
AAAGACGTCA TGACCGAAAT AGATATGCAC GAAGGCTTCG ACGTCGGTTT AGAAATGTCT
GGCAATGACA TGGCCTTCCG TTCGATGCTG GAATGCATGA ATCATGGCGG AAAAATTGCC
ATGTTAGGTA TTCCAGGCAA AGACACACTC ATAGATTGGA ACCAAGTTAT CTTTAAAGGC
CTGATTATCA AAGGTATTTA TGGTCGAGAA ATGTATGAAA CTTGGTACAA GATGGTTGCT
ATGCTGCAGT CTGGCTTGGA CATTAGCCCA ATCATTACCC ATCGCTTTAA AGTCGATGAA
TTTCAGCAAG GCTTTGACAC CATGGGCTCA GGTCTATCAG GAAAAGTCAT TTTGGATTGG
AATTAA
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| Protein sequence | MKTLAKLHAE KGIWMTDVPH PDCGHNDVVI KISKTAICGT DMHIYQWDDW AQNTIPVPMT
VGHEFVGVIT EVGPEVSGFK IGDRVSGEGH ITCGHCRNCR AGRRHLCRKT LGVGVNRTGA
FAEYLVIPAS NAFKIPNNIS DDMAAIFDPF GNATHTALSF DLIGEDVLIT GAGPIGAMAA
AIAKHVGARN VVITDVNDFR LDLAKKMGAT RTVNVSRESL KDVMTEIDMH EGFDVGLEMS
GNDMAFRSML ECMNHGGKIA MLGIPGKDTL IDWNQVIFKG LIIKGIYGRE MYETWYKMVA
MLQSGLDISP IITHRFKVDE FQQGFDTMGS GLSGKVILDW N
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