| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3769 |
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| Symbol | |
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| ID | 5368815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 4250089 |
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| End bp | 4250634 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640806152 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_001342605 |
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| Protein GI | 152997770 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000183564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAT TAAAACAAGC GGCCGCTCCT GAGCAAGCCC TTGTGGTTGG ACGCATTACA
TCGGTATATG GTGTTAAAGG GTGGGTGAAG TTATATTCTC ACACCGAACC AATGCAAGGG
ATCTTTGATT ATAAGCATTG GTGGTTGAAA ACTCCTAGTG GGTGGAAGAC CGTAGAATTA
AGCCAAGGCC GTCTGCAAGG GCGAGGTTTG GTAGCATCGG TAAAAGGTTA TACCGACAGA
GATCAAGTAA AAGATATCTG TGGTATGGAC GTTTATATAG ATGCAGCAGA ACTGCCAGAA
TTGGAAGAAG GTGATTATTA CTGGAGCCAA CTGGAAGGAC TGAGGGTTAT TACCAAAGAG
GGTGTCCTCT TAGGGAAGGT TTCTCAACTT ATGGAAACTG GTGCGAATGA TGTAATAGTT
GTCCGCGCGT GTGAAGGTAG CTTTGATCGT GAAGAGCGAT TGATTCCTTA TGCTCCAGGA
ACTTATGTTT TAAACATCGA TTTAGAACAG CAGGAAATGG TAGTGGACTG GGATCCAGAA
TTTTAA
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| Protein sequence | MSELKQAAAP EQALVVGRIT SVYGVKGWVK LYSHTEPMQG IFDYKHWWLK TPSGWKTVEL
SQGRLQGRGL VASVKGYTDR DQVKDICGMD VYIDAAELPE LEEGDYYWSQ LEGLRVITKE
GVLLGKVSQL METGANDVIV VRACEGSFDR EERLIPYAPG TYVLNIDLEQ QEMVVDWDPE
F
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