Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3685 |
Symbol | |
ID | 5367695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 4161109 |
End bp | 4161810 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640806068 |
Product | aspartate racemase |
Protein accession | YP_001342521 |
Protein GI | 152997686 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1794] Aspartate racemase |
TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.209881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA TCGGCATTAT TGGTGGCATG AGTTGGGAGT CTTCCGCTTT GTACTACCAA AATATCAATG AGATGACTAA GCAGAAATTA GGCGGGCTGC ATTCAGCTAA GATTATTTTA TCCAGTGTTG ATTTTGCCGA GATTGAGCGC TTGCAACATC TAGGCGATTG GACGCAACTA GGAGAAATAC TTACAGCAGA AGCTAAACAT TTAGAGCAAG CCCAAGCAGA CTTCATTCTT ATCGCAACCA ATACCATGCA CAAGGTGGCA GATATTGTTC AAAATGCCAT ACAGATTCCT TTACTGCACA TTGCTGATGC GACGGCCAAA GAGCTTGTTA AGAAAAAATA TCAGAAAGTT GGCTTTATTG GTACTCGCTA TTCCATGGAA GAAGACTTCT ATATTAAACG ACTAGAAGAG CAATATGGTT TAGTGGTAAT CACACCATCG AAGCAAGACC GAGACAATAT CCATAGAATT ATTTACGAGG AATTATGTCT CGGTAAAATC CTCCCTGAAT CAAGGGAAAC TTATATAGAC ATTGTTAATC GCCTTCATGC AGCCGGAGCG GAAGCTGTCA TTGAAGGATG CACGGAAATC ACCCTACTGC TCAAGCAAGA ACACGTCATT GTGCCTTTAT TTGATACCAC CTACATTCAC GCCAAAGCCG CAGTGGATGA AGCCTTAACC CCCACACTTT GA
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Protein sequence | MKTIGIIGGM SWESSALYYQ NINEMTKQKL GGLHSAKIIL SSVDFAEIER LQHLGDWTQL GEILTAEAKH LEQAQADFIL IATNTMHKVA DIVQNAIQIP LLHIADATAK ELVKKKYQKV GFIGTRYSME EDFYIKRLEE QYGLVVITPS KQDRDNIHRI IYEELCLGKI LPESRETYID IVNRLHAAGA EAVIEGCTEI TLLLKQEHVI VPLFDTTYIH AKAAVDEALT PTL
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