| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3678 |
|---|
| Symbol | |
|---|
| ID | 5366490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4154950 |
|---|
| End bp | 4156452 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640806061 |
|---|
| Product | cobyric acid synthase CobQ |
|---|
| Protein accession | YP_001342514 |
|---|
| Protein GI | 152997679 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0664782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.329019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCCT TTAGTTTAAT GATCCAAGGA ACCACCTCGG ATGCCGGAAA AAGCACCCTA
GTCACGGCAT TATGTCGTTT ATTTTATCGT CGAGGCATTT CCGTTGCGCC CTTCAAACCG
CAAAACATGG CATTAAACAG CGCGGTCACC AAAGACGGTA ATGAAATTGG TCGAGCACAA
GCGGTACAGG CCTATGCAGC AGGGTTAGAA CCGCAAGTAG ATATGAACCC CATTCTACTC
AAACCCAATA CAGACACCGG GGCGCAAGTC ATTATTCAAG GCAAAGCCGT GGGCAACATG
AACGCCGTGG GGTATCACGA ATACAAAAGT ATCGCCAAAG TCGCTGCATT GGATTCATAT
CAGCGTCTTG CCAATCAATA CCAAGCGGTC TTAATTGAAG GCGCTGGCAG CCCAGCGGAA
ATAAACTTAC GCGCTCGTGA TATCGCTAAT ATGGGCTTTG CTGAAAGCAT CGATTGTCCA
GTTATCATCA TTGCCGACAT AGACAAAGGT GGCGTGTTTG CTCACCTCGT TGGAACGCTG
GATTTACTTA GCCCAAGTGA GCAAGATCGA GTCATTGGCT TTGTGATAAA CCGCTTTCGT
GGCGATATTA GCTTATTACA GTCTGGCCTT GACTGGCTTG AAGAACGCAC AGGCAAACCT
GTCTTAGGGG TGCTGCCCTT CTTAAAAGGT TTCCATTTAG AATCCGAAGA CGCCGTTGCC
AAAAGCCCCA TTAAAGCAGA CAGCAAGGCC AAACTAAACA TCGTCATACC GATCATGCCG
CGCACCAGCA ACCACACAGA CTGGGACGCT CTGCGCCTTC ATCCAGAAGT TCAAGTCACC
CTAGTAGGCG CCAACGAAAC CATTCCACCT GCTGACTTGG TTATTTTACC TGGCAGCAAA
AGCGTACAAA GCGACCTCGC CTATTTACGT CAAGAAGGCT GGGAAGACTA CCTCAACAAA
CACTTACGAT ATGGCGGCAA AGTCATCGGG ATTTGCGGCG GGTATCAAAT GCTCGGCGAA
CAACTGCTGG ATCCACTAGG ACTAGAAAAC CAACACGCTA ACACGCGATC TACAGGTTTT
GGCTTTATCC CCATGGAAAC TGTCTTAAAA GAGGAGAAAC AGCTTAAGCA ACGCCAAGGG
CAACTCGCTT TCGCAGCCAA TGCTCAAGTG ACAGGCTATG AAATTCATTC AGGGGTTTCA
CGCTTTACCG ATGAAACACA GATTGCGCAT TTCGCTCTCT TAGATGATGG AAAGAACAAA
GAAAACAGCG AGAAAGAAGG CTACATATCA CCAGATGGTC AAATCATCGG CACTTATCTA
CATGGTGTCT TCGATCACCC AGACGCCCTA CAAGCCCTAC TCAACTGGGC GGGTGTAGAC
CAAGCTGCAG CATTTGACTA CGACCAATTT CGCGACAAAG AAATTGACCG ACTTGCCGAC
AGTACAGAAC AAAATATGAA CATCGATGCA CTAATTGAAC AGTGTCAAAA CTTCCAGCAA
TAA
|
|---|
| Protein sequence | MPAFSLMIQG TTSDAGKSTL VTALCRLFYR RGISVAPFKP QNMALNSAVT KDGNEIGRAQ
AVQAYAAGLE PQVDMNPILL KPNTDTGAQV IIQGKAVGNM NAVGYHEYKS IAKVAALDSY
QRLANQYQAV LIEGAGSPAE INLRARDIAN MGFAESIDCP VIIIADIDKG GVFAHLVGTL
DLLSPSEQDR VIGFVINRFR GDISLLQSGL DWLEERTGKP VLGVLPFLKG FHLESEDAVA
KSPIKADSKA KLNIVIPIMP RTSNHTDWDA LRLHPEVQVT LVGANETIPP ADLVILPGSK
SVQSDLAYLR QEGWEDYLNK HLRYGGKVIG ICGGYQMLGE QLLDPLGLEN QHANTRSTGF
GFIPMETVLK EEKQLKQRQG QLAFAANAQV TGYEIHSGVS RFTDETQIAH FALLDDGKNK
ENSEKEGYIS PDGQIIGTYL HGVFDHPDAL QALLNWAGVD QAAAFDYDQF RDKEIDRLAD
STEQNMNIDA LIEQCQNFQQ
|
|---|
| |