| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3602 |
|---|
| Symbol | |
|---|
| ID | 5368311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 4066841 |
|---|
| End bp | 4067419 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640805973 |
|---|
| Product | outer membrane lipoprotein LolB |
|---|
| Protein accession | YP_001342439 |
|---|
| Protein GI | 152997604 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0266005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.277706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTATC GCACGCTCTG TATTCTTGCT TTTACCGCAC TTATTAGCGC CTGTAGCTCC
AGACCAACAG GACCTACAAC ACCACCGCCA GAAAGTGTTA GCGCCATTTC GAAATGGGAA
ACATCTGGCA GAGTGGGTAT ACGAACAAAA AATGATGCTG TTTCCGGCAA CTTCAATTGG
CAAAAAGATC CAAAAACATT TGCCTTAAGT ATCGTTGGTC CTTTCGGACA AGGTGCGACT
CACTTAAACC AATCAAATGA TGGCGTTGTG ACATTAGCCT ATGAAGATAC CGTCGTCACA
GGCAACAATC CAGAGACCTT ACTACAACAA GAGTTAGGCT GGGAGTTCCC TGTCAACCAA
GTCACCTATT GGATTAGGGG ACTAGCCTAT CCAAATTCTG CGGCTAAAAT AAGCAAAGAC
CCAGACAGTC AATTGCCAAA TAAAATAGAA CAAGATGGCT GGCTTATTAC CTATAGCAAC
TTCACTAAGG TAGATGGTTT GTCTTTACCG CAAAAAATGC AGGTATCAAA CCCTCCATTT
AGAGTCAATC TGATCATTAA CCAATGGACT ATTCAGTAA
|
|---|
| Protein sequence | MTYRTLCILA FTALISACSS RPTGPTTPPP ESVSAISKWE TSGRVGIRTK NDAVSGNFNW
QKDPKTFALS IVGPFGQGAT HLNQSNDGVV TLAYEDTVVT GNNPETLLQQ ELGWEFPVNQ
VTYWIRGLAY PNSAAKISKD PDSQLPNKIE QDGWLITYSN FTKVDGLSLP QKMQVSNPPF
RVNLIINQWT IQ
|
|---|
| |