| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3514 |
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| Symbol | |
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| ID | 5368663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 3961677 |
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| End bp | 3962612 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640805886 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001342352 |
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| Protein GI | 152997517 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.329161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.230148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATA AGGCTAAGAA GACGGCAATT GCCATAAGCG TGGCAGGTAT TTCAGGACTA
ACCCTGGCAG CAGATTGCTC TACGGTTCGC TTTTCCGACG TAGGTTGGAC TGATATTACA
GCCACCACAG CGGTAACCAG TGAAATCGTA GAAGGTCTAG GGTACAAATC CAAAACACAA
TTGTTATCTG TTCCTGTTAC TTACACTTCG CTAGCAAATG GCGATATAGA TGTCTTTCTT
GGCAACTGGA TGCCTACCAT GCAGGCTGAT ATCGAACCTT ACCTAAAAGC TGGCACGGTT
GAAGACCTTG GTGCAAACCT AGTCGGTGCC AAATACACAC TAGCGGTTAG TAAAGACGCT
TTTGATGCAG GCGTAACGGA CTTTTCAGAC ATAGCAAAAC ATCGCAAAGA ATTTTCTGGT
CGCATTTACG GTATAGAGCC GGGCAATGAC GGCAACCGCA TTATCCAAAA TATGATCGAT
ACCAACGCCT TTGATCTAGG CAATTTCCAA CTGGTTGAAT CCAGCGAAGC TGGCATGTTA
TCGCAAGTTA GCCGTAATAC CCGTCGTAAC AAATGGATCG CTTTCCTAGG CTGGGCACCG
CACCCAATGA ATGCCAACTT TAAAATGGAA TACCTTTCAG GTGGTGACGA CTATTTCGGC
CCAAATTACG GTGGAGCTGA TGTTCACACC AACGTTCGTA AAGGCTACAT CCAACAATGT
CCTAACGTAG GCAAACTTAT CGCCAACCTA AAATTCTCTT TGCCTATGGA AAACCAAATC
ATGGGCGCCA TTCTTGATGA AGGCAAAAAA CCTAACATCG CAGCAAAAGA ATGGTTAAAA
GCAAACCCTG AAGTTCTGGA TGCTTGGCTT AAAGGTGTCA CAACTCAATC GGGTGATAAC
GGCCTAAGCG CTGTGAAATC ACACCTAGGT CTATAA
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| Protein sequence | MLNKAKKTAI AISVAGISGL TLAADCSTVR FSDVGWTDIT ATTAVTSEIV EGLGYKSKTQ
LLSVPVTYTS LANGDIDVFL GNWMPTMQAD IEPYLKAGTV EDLGANLVGA KYTLAVSKDA
FDAGVTDFSD IAKHRKEFSG RIYGIEPGND GNRIIQNMID TNAFDLGNFQ LVESSEAGML
SQVSRNTRRN KWIAFLGWAP HPMNANFKME YLSGGDDYFG PNYGGADVHT NVRKGYIQQC
PNVGKLIANL KFSLPMENQI MGAILDEGKK PNIAAKEWLK ANPEVLDAWL KGVTTQSGDN
GLSAVKSHLG L
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