| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_3394 |
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| Symbol | |
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| ID | 5365589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3841634 |
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| End bp | 3842536 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640805766 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001342232 |
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| Protein GI | 152997397 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000468714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.359184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGAGA AGTTACAAAA AGTATTAGCA AGAGCGGGTC AGGGTTCACG TCGTGAAATG
GAAACTCGTA TCCGTGAAGG TCGTGTATTA GTTAATGGCG AAGTTGCCAC ATTGGGTGAC
CGCGTTAGCG TTAAAGATAC GATTACAATA GACGGTTACT CTATTATTGC TACTGAAGCC
GGTGAAAACC GCCGTGTTAT TATTTATAAC AAACCAGAAG GCGAAGTGTG TACTCGTAAA
GACCCTGAGG GTCGACCTAC AGTGTTTGAT AAACTGCCAA AACTGCGCGG AGAGCGTTGG
ATTGCCGTTG GTCGTTTGGA TATCAATACG TCAGGTTTGT TACTTTTCAC TACTGATGGT
GAATTGGCCA ATCGGTTGAT GCATCCATCT ACTGAGATAG ATCGTGAATA CCTTGTCCGC
GTGATGGGGG AAGTTACTGA TGAAAATTTA GCCGCGTTGA AAAAAGGCGT CATTTTAGAT
GATGGCATTG CCAAATTTAC AGATATCGTT GATGGTGGTG GTGAAGGTAT TAACCGCTGG
TTCTATGTTT GTTTGATGGA AGGTCGTAAT CGTGAAGTTC GTCGCCTATG GGAATCTCAA
GGTGTAAAAG TTAACCGTTT GAAACGAGTT CGCTTTGGCC CTGTCTTCTT ACCTTCGAAA
GCAAAAGTTG GCCGTTGGGT GGAAATGGAA GAAACCGATG TTAACTCATT ATGCGCCATG
GTTGATCTTA AATTATCGGA ATTGACACCA AAAACCCAGC AAGAAAAATT AGAATTAAAA
CGCCACAAAA ACAAAGCAAC TGCAGGCGGA GCTCGCCGTG CACCACCTAA GGGTTTTGAT
TGGCAGAGCA ATGACAAACC TGAGTTTAAA CCTAAAAAAC CAGGTAAAAG ATCGTTTCGT
TAA
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| Protein sequence | MDEKLQKVLA RAGQGSRREM ETRIREGRVL VNGEVATLGD RVSVKDTITI DGYSIIATEA
GENRRVIIYN KPEGEVCTRK DPEGRPTVFD KLPKLRGERW IAVGRLDINT SGLLLFTTDG
ELANRLMHPS TEIDREYLVR VMGEVTDENL AALKKGVILD DGIAKFTDIV DGGGEGINRW
FYVCLMEGRN REVRRLWESQ GVKVNRLKRV RFGPVFLPSK AKVGRWVEME ETDVNSLCAM
VDLKLSELTP KTQQEKLELK RHKNKATAGG ARRAPPKGFD WQSNDKPEFK PKKPGKRSFR
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