Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3392 |
Symbol | |
ID | 5365962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 3840365 |
End bp | 3841084 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640805764 |
Product | two component transcriptional regulator |
Protein accession | YP_001342230 |
Protein GI | 152997395 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000345034 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.431956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAG ATGACAACAG AACCATTTTG ATTGTTGAAG ACGATGAGCG TTTGGCGTTA CTCACTCAAG AGTATTTGCA AAAAAATGGC TTTACTGTTG GGATCGAACC TGATGGACGC AAAGCTATTT CCCGTATTGT TGAGGAACAG CCATCTTTGG TTATTCTAGA TCTTATGTTG CCGGGCGCAG ATGGTTTTAC AGTGTGTAGA AGTGTTCGCA ATGACTACAA AGGACCTATT CTGATGTTAA CTGCTCGTAG TGACGATGTT GATCAGATAT TAGGTTTAGA AATAGGTGCG GATGATTATG TATCTAAACC TGCTAAGCCA AGAGTTTTGT TGGCTCGAGT TCAATCTTTG TTGCGTCGCA GTACGCAGGA TGTAGATTTG ACGCTTGACC TTTCCAAGGA AGAGCAAAAC TTAACTTTTG GGCCGCTAAC AATTGATAAC TCTCGCCGTG AAGCTTGGTT GCTTGAAGAA GAAATTGAAT TAACGAGTGC TGAGTTTGAT TTGTTGTGGT TGCTATCTAG TAATGCCGGC CGCATTTTAA GTCGAGAAGA AATTTTTGGT GAATTGCGTG GCATTGAGTA CGATGGTCAG GATCGCTCGG TTGACGTTAG AATCTCCCGT ATACGTTCAA AAATAGGCGA TGATCCAATT CATCCTCGCC GTATAAAGAC TATTCGCAGT AAAGGCTACC TGTTCGTAAA AGAAGTATAG
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Protein sequence | MSIDDNRTIL IVEDDERLAL LTQEYLQKNG FTVGIEPDGR KAISRIVEEQ PSLVILDLML PGADGFTVCR SVRNDYKGPI LMLTARSDDV DQILGLEIGA DDYVSKPAKP RVLLARVQSL LRRSTQDVDL TLDLSKEEQN LTFGPLTIDN SRREAWLLEE EIELTSAEFD LLWLLSSNAG RILSREEIFG ELRGIEYDGQ DRSVDVRISR IRSKIGDDPI HPRRIKTIRS KGYLFVKEV
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