Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_3066 |
Symbol | |
ID | 5367864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 3476380 |
End bp | 3476874 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640805438 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001341911 |
Protein GI | 152997076 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00609766 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00646001 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGGGG CGCAAAAACT GGATCGACTT GATATTCGTA TTTTAAGCCA TCTACAGCGT AACGGTCGTA TTTCCAATGT TAACTTAGCG GATGCCGTAG GTTTATCACC CAGCCCCTGC TTAACACGAG TTAAGCGATT AGAAAAAGCC GGTTACATTA TTGATTACGG CGCTCACATT CAATTAGAAA AGCTCGGCAC CATTCAACGG GTTTTCACTC AGGTCACTCT AAAAGATCAT CGCCCAGATC ACTTTGCCCA ATTCGAAAAC TACATTCGAA AACTAGACGA AGTGCAAGAG TGCCATCTTG TCAGTGGCGG TTTCGACTAT CAGCTAATTT TCCTAACTCG CAACGTAGTC CACTATCAAA CCGTAATGGA AGAATTACTC GACAAGAACC TCTTTATCGA TAAATATTTC AGCTACATAG TGATCAAATC TCCTATCGTC AAAAAATATT ATCCTATCGA TAATTTATTT ACGCCTGAAG ATTAA
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Protein sequence | MNGAQKLDRL DIRILSHLQR NGRISNVNLA DAVGLSPSPC LTRVKRLEKA GYIIDYGAHI QLEKLGTIQR VFTQVTLKDH RPDHFAQFEN YIRKLDEVQE CHLVSGGFDY QLIFLTRNVV HYQTVMEELL DKNLFIDKYF SYIVIKSPIV KKYYPIDNLF TPED
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