| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2987 |
|---|
| Symbol | |
|---|
| ID | 5365088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 3374596 |
|---|
| End bp | 3376176 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640805360 |
|---|
| Product | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001341833 |
|---|
| Protein GI | 152996998 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.709991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.888371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAA ATCAAAATAC AGTAACTCCA ATCAAACGAG CGTTAATCAG TGTTTCCGAC
AAAACAGGCA TTGTCGAATT CGCACGCGAA CTGACCGCTC AAGGCGTTGA AATTCTTTCA
ACAGGTGGTA CTTACCGTCT TTTATTGGAC AGCAAAGTTA AAGCAACTGA AGTTTCTGAC
TACACAGGCT TCCCAGAAAT GATGGACGGC CGCGTAAAAA CGCTACACCC AAAAGTGCAC
GGTGGCATTC TTGGTCGTCG TGACATCGAT GGCGCCATCA TGAAAGAGCA CGGTATCGAA
GAAATCGATA TGGTTGTTGT CAACCTTTAT CCATTCGAAG CGACCATCGA GCGTCCTGAT
TGCGATTTAC CAATGGCGAT CGAAAACATC GATATCGGTG GTCCAACTAT GGTTCGCTCT
GCAGCGAAAA ACCATAAAGA CGTTGCTATT GTGGTATCTC CTTCTAGCTA CGAAGAAATC
TTAGCTTCTC TTAAAGCAGA TGACGGTTTG ACTTATGAGC AGCGCTTCGA TCTTGCCGTA
AAAGCATTCG AACATACATC TCACTATGAT GGCGCTATTG CAAACTTCCT AGGCAAAAAA
GTAGAAGGCG GCAGCGAAGA TTTTGCGCGC ACCTTCAACT TACAATTCAA CAAGCAAGAA
GAAATGCGCT ACGGTGAAAA CCCCCACCAG AAAGCCGCTT TCTATGTTGA AGCGAATCCT
AAAGAAGCAT CCATCAGCAC TGCTAAACAA ATCCAAGGTA AGGCACTGTC TTACAACAAC
ATCGCAGACA CCGATGCGGC TCTTGAGTGC GTAAAAAGCT TTGATAAACC TGCTTGTGTT
ATCGTTAAGC ACGCGAACCC TTGTGGTGTA GCAACGGCAG CGACACAACT TGAAGCATAC
GACCTAGCTT TCCAAACCGA TCCAACGTCG GCATTTGGTG GCATCATTGC ATTCAACCAA
GAGTTAGATG CAAAAACAGC ACAAGCCATT GTTGACCGCC AATTTGTTGA AGTTATCATT
GCGCCAAGCG TCAGCAAAGA AGCAGCGGAA GTCGTAGCGG CTAAGCAAAA TGTTCGCTTG
TTAGAGTGCG GCCAATGGTC AAAAGACAAA CCTGCGGCAC TAGACTACAA GCGCGTAAAC
GGCGGTCTAT TGGTTCAAGA CCGTGATGAC GGCGTTATTA CTTTAGACGA TCTTAAAATC
GTCTCTAAAC GTCAGCCTAG CGAAGAAGAA CTAAAAGACT TATTGTTTGC TTGGAAAGTA
GCGAAATTCG TTAAATCCAA TGCTATTGTT TATGCAAAAG CTGAACAAAC TATTGGTGTA
GGCGCAGGCC AAATGAGCCG TGTCTACAGC GCTAAAATTG CCGGTATCAA AGCAGCTGAC
GAAAATCTAG AGGTAGCGGG TTCAGTCATG GCTTCGGATG CTTTCTTCCC ATTCCGTGAC
GGTATTGATG CTGCGGCTCA AGCTGGTATT ACAGCAGTTA TCCAACCTGG CGGCTCTATG
CGCGACGAAG AAGTCATTGC CGCAGCCGAT GAAGCTGGCA TGGCTATGGT CTTTACAGGA
ATGCGCCACT TCCGTCATTA A
|
|---|
| Protein sequence | MMANQNTVTP IKRALISVSD KTGIVEFARE LTAQGVEILS TGGTYRLLLD SKVKATEVSD
YTGFPEMMDG RVKTLHPKVH GGILGRRDID GAIMKEHGIE EIDMVVVNLY PFEATIERPD
CDLPMAIENI DIGGPTMVRS AAKNHKDVAI VVSPSSYEEI LASLKADDGL TYEQRFDLAV
KAFEHTSHYD GAIANFLGKK VEGGSEDFAR TFNLQFNKQE EMRYGENPHQ KAAFYVEANP
KEASISTAKQ IQGKALSYNN IADTDAALEC VKSFDKPACV IVKHANPCGV ATAATQLEAY
DLAFQTDPTS AFGGIIAFNQ ELDAKTAQAI VDRQFVEVII APSVSKEAAE VVAAKQNVRL
LECGQWSKDK PAALDYKRVN GGLLVQDRDD GVITLDDLKI VSKRQPSEEE LKDLLFAWKV
AKFVKSNAIV YAKAEQTIGV GAGQMSRVYS AKIAGIKAAD ENLEVAGSVM ASDAFFPFRD
GIDAAAQAGI TAVIQPGGSM RDEEVIAAAD EAGMAMVFTG MRHFRH
|
|---|
| |