| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2855 |
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| Symbol | rpsA |
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| ID | 5367076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 3230353 |
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| End bp | 3232035 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640805229 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001341702 |
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| Protein GI | 152996867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000740795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000202949 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCAAA GCTTCGCAGA ACTGTTTGAA GAAAGCCTAT TAACCGTCGA AATGGCGCCA
GGCTCAATTG TTACTGGTAT TGTTGTTGAT ATCGACAGCG AGTGGGTAAC TGTTCATGCA
GGTCTTAAAT CTGAAGGCGT AATTCCTCGT TCTCAGTTCC TAACGGATAG TGGTGAGTTC
AACTTAAACA TCGGTGACGA AGTTAAAGTT GCTCTTGACG CTGTTGAAGA TGGCTTCGGT
GAGACTAAAT TGTCTCGTGA AAAAGCTAAA CGTGCAGAAA CTTGGTCTGT GCTTGAAAAA
GCTTACGAAG AAAACGCCAT TGTTCACGGT GTTATCAATG GTAAAGTCAA AGGTGGCTTC
ACAGTTGATA TCGCTAACAT CCGTGCTTTC TTGCCTGGCT CTTTGGTAGA TGTTCGCCCA
ATCCGCGACA CATCTCACTT GGAAGGTGTG GATCTAGAGT TCAAACTTAT CAAGCTTGAT
CAAAAACGTA ACAACGTTGT TGTTTCTCGT CGTGCCGTTA TGGAAGCGAC TAACAGCGCT
GAACGTGAAA CATTGCTTGC TTCTCTTGAA GAGGGTCAAG AAGTTAAAGG TATCGTTAAG
AACCTTACTG ACTACGGTGC TTTCGTTGAT CTTGGTGGTG TTGATGGTCT TCTACACATC
ACTGACATGG CTTGGAAACG CATCAAACAC CCAAGCGAAA TCATTGCTGT TGGCGATGAA
ATCGATGTTA AAGTACTTAA GTTTGACCGC GAGCGTAACC GTGTGTCTCT AGGTCTTAAG
CAGTTGGGTG AAGATCCATG GGTTGCTATC AAAGCACGTT ACCCAGAAAA CACTAAAGTA
ACTGCTAAAG TTACTAACTT GACTGATTAC GGCTGCTTCG CTGAACTTGA AGAAGGCGTA
GAAGGTCTAG TTCACGTTTC TGAAATGGAT TGGACTAACA AAAACATTCA CCCATCTAAA
GTTGTTCAGA TCGGTGATGA AGTTGAAGTT ATGGTTCTTG ATATTGATGA AGAGCGTCGT
CGTATTTCTT TGGGTATCAA GCAGTGCACA ATGAACCCAT GGGAAGAGTT CGCAACTTCT
TTCAATAAAG GCGACAAAAT CTCTGGCGCT ATCAAGTCTA TTACTGACTT TGGTGTGTTC
ATTGGTCTTG ACGGTGGTAT CGATGGTCTT GTTCACCTAT CTGACCTATC TTGGGACGAA
ACTGGTGAAG AAGCAGTACG TCAATACAAG AAAGGCGATA TGTTAGAGAC TGTTGTATTG
TCTATCGACG CTGAGCGTGA GCGTATTTCT CTAGGTGTTA AACAACTAGA AGAAGATCCG
TTCCTAGCAT TCGTTGCTGA AAATGACAAA GGCACTATCG TTAACGGTAC TGTTTCTGAA
GTTGATGCAA AAGGTGCGGT AGTTGTTCTT GCTGAAGGCG TTGAAGCTAC TTTGAAAGTA
TCTGAAATCA GCCGTGAACG TATTGAAGAT GCAACAACTG CATTGAAAGA AGGCGACAAA
GTAGAAGCTG CGATCATCAA TGTTGATCGT AAAGCTCGTA CTATCACTCT TTCTATCAAG
CAGAAAGATG CTACTGAAGA GAAAGCTGCG TTGAAATCTC ATTCTGAGAA GCAACAAGCT
GAAACTAATG GTCCAACCAC TATTGGTGAT TTGATCAAAG CACAACTAGA AAACCAAAAC
TAA
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| Protein sequence | MTQSFAELFE ESLLTVEMAP GSIVTGIVVD IDSEWVTVHA GLKSEGVIPR SQFLTDSGEF
NLNIGDEVKV ALDAVEDGFG ETKLSREKAK RAETWSVLEK AYEENAIVHG VINGKVKGGF
TVDIANIRAF LPGSLVDVRP IRDTSHLEGV DLEFKLIKLD QKRNNVVVSR RAVMEATNSA
ERETLLASLE EGQEVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRIKH PSEIIAVGDE
IDVKVLKFDR ERNRVSLGLK QLGEDPWVAI KARYPENTKV TAKVTNLTDY GCFAELEEGV
EGLVHVSEMD WTNKNIHPSK VVQIGDEVEV MVLDIDEERR RISLGIKQCT MNPWEEFATS
FNKGDKISGA IKSITDFGVF IGLDGGIDGL VHLSDLSWDE TGEEAVRQYK KGDMLETVVL
SIDAERERIS LGVKQLEEDP FLAFVAENDK GTIVNGTVSE VDAKGAVVVL AEGVEATLKV
SEISRERIED ATTALKEGDK VEAAIINVDR KARTITLSIK QKDATEEKAA LKSHSEKQQA
ETNGPTTIGD LIKAQLENQN
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