| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2334 |
|---|
| Symbol | |
|---|
| ID | 5365782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 2635920 |
|---|
| End bp | 2637437 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640804698 |
|---|
| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
|---|
| Protein accession | YP_001341191 |
|---|
| Protein GI | 152996356 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000449013 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0431842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA TCAAAGAAGA TGATCTGATT GATAGCGTTG CAGACGCATT GCAGTTTATC
TCTTATTACC ACCCTTTGGA TTTCGTAAAA GCGGTACATG AAGCGTACGA GCGAGAAGAG
AGCAAAGCTG CGAAAGATTC AATGGCGCAA ATTCTGATTA ACTCTCGCAT GTGTGCGGAA
GGAAAGCGTC CAATTTGTCA GGATACGGGG ATTGTTACCG TATTTGTAAA AATTGGTATG
AATGTTCAGT GGGAAGGCAC GAAAAGCGTT ACTGATATGA TCAATGAGGG TGTGCGTCGT
GCTTATCTTC ACCCAGATAA TGTCTTACGT GCTTCTATTT TGGCTGATCC TGCTGGTGCG
CGTAAAAATA CCAAAGACAA TACGCCTGCT GTTATTCACA TGGAAGTTGT TCCTGGTGAT
ACTGTTGACG TTCATGTTGC TGCTAAAGGT GGCGGATCTG AAAACAAATC TAAAATGGCA
ATGCTAAACC CATCTGATGA TATTGTTGAA TGGGTTAAAA AGACTGTTCC TACTATGGGA
GCGGGCTGGT GTCCTCCTGG AATGCTTGGT ATTGGTATTG GTGGTACGGC GGAGAAGGCC
ATGGTTATGG CAAAAGAATC TCTAATGGAG CCAATTGATA TTCATGAATT GAAGGCGCGT
GGTCCACAAA ATCGTGTAGA AGAACTGCGT CTAGAAATTT TTGAAGCAGT AAATAATTTA
GGGATAGGTG CGCAAGGCTT GGGTGGCTTA ACAACCGTGC TTGATGTGAA AATCATGGAC
TACCCAACTC ATGCGGCGTC TTTGCCTGTT GCCATGATCC CAAATTGTGC TGCTACGCGT
CACGCACATT TTGTGCTTGA TGGTTCTGGT CCGGCGGATT TGGTGCCGCC ATCATTAGAT
GATTGGCCAG AAATTACTTG GGAAGTCGGG GAAAGTGTTC GTCGAGTTGA TTTGAACACA
ATTACGCCTG AACAAGTAAA AGAGTGGCAA CCTGGCGAGA CTGTTTTGTT AAACGGTAAA
ATGCTAACCG GTCGTGATGC TGCCCATAAG AAAATGGTTG AGATGATTGC TAACGGCGAA
GAGCTTCCCG TTGATCTTAA GGGGCGCTTC ATTTATTACG TTGGACCTGT TGATCCAGTA
AGGGATGAAG CGGTGGGGCC TGCTGGACCG ACGACAGCAA CACGTATGGA TAAATTTACC
CGCACAATTT TAGATAAAAC AGGTCTGCTT GGCATGATCG GTAAATCTGA ACGTGGTCCT
GTTGCAATTG ACGCGATTAA AGAGTTTGGT GCAGTTTACC TAATGGCGGT AGGTGGCGCG
GCTTATTTGG TTTCTAAAGC AATTAAAAAA GCAGATGTTG TTGCCTTTCC TGAACTAGGT
ATGGAGGCTA TCTATGAATT TGATGTTGTT GATATGCCTG TAACTGTTGC AGTAGATACC
TTGGGCACAT CTGTACATAT TACAGGGCCT GCTGAATGGA AAGCCAAAAT CGAAGCACAA
GCGCTCGAAA TTAAGTAA
|
|---|
| Protein sequence | MSIIKEDDLI DSVADALQFI SYYHPLDFVK AVHEAYEREE SKAAKDSMAQ ILINSRMCAE
GKRPICQDTG IVTVFVKIGM NVQWEGTKSV TDMINEGVRR AYLHPDNVLR ASILADPAGA
RKNTKDNTPA VIHMEVVPGD TVDVHVAAKG GGSENKSKMA MLNPSDDIVE WVKKTVPTMG
AGWCPPGMLG IGIGGTAEKA MVMAKESLME PIDIHELKAR GPQNRVEELR LEIFEAVNNL
GIGAQGLGGL TTVLDVKIMD YPTHAASLPV AMIPNCAATR HAHFVLDGSG PADLVPPSLD
DWPEITWEVG ESVRRVDLNT ITPEQVKEWQ PGETVLLNGK MLTGRDAAHK KMVEMIANGE
ELPVDLKGRF IYYVGPVDPV RDEAVGPAGP TTATRMDKFT RTILDKTGLL GMIGKSERGP
VAIDAIKEFG AVYLMAVGGA AYLVSKAIKK ADVVAFPELG MEAIYEFDVV DMPVTVAVDT
LGTSVHITGP AEWKAKIEAQ ALEIK
|
|---|
| |