| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2190 |
|---|
| Symbol | ruvB |
|---|
| ID | 5368725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2468626 |
|---|
| End bp | 2469639 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640804535 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001341047 |
|---|
| Protein GI | 152996212 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000182664 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.290064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAC AAGATCGTAT TATTTCTGCT GAACTTAAAG GTAATGATCG TCAAGTAGAT
CGGGCAATAC GTCCGCAGGC GCTTGCTGAA TATATTGGTC AGCCCGTTGT TCGAGAGCAG
ATGGAAATTT TTATCCAGGC TGCAAGGCAA CGTGGAGAGC CATTAGATCA TACGTTAATA
TTTGGGCCTC CAGGTCTAGG AAAAACTACT CTTGCTAATA TCATTGGCAA TGAGATGGGA
GCTGAGGTAA GAACAACTTC TGGTCCAGTT CTTGAAAGAG CTGGTGATTT AGCAGCGCTA
CTAACAAACT TAAATGAAGG TGACATTCTA TTTATTGATG AAATACATAG ATTAAGCCCA
GCAATTGAAG AAGTGCTTTA TCCTGCTATG GAAGATTATC AGCTGGATAT AATGATTGGC
GAAGGTCCAG CTGCTAGGTC AATTAAAATT GAACTCCCGC CATTTACACT TGTCGGAGCA
ACTACACGAG CAGGTCTACT GACATCTCCA CTGCGAGATC GTTTTGGTAT TGTTCAGCGG
TTAGAGTTTT ATGATGTTGA ATCATTGACA ACTATTGTGG CTCGCTCGGC TGGAAAAATG
GGTGTGGAGC TTGATCAGTC TGGTTGCTTC GAAGTCGCCA GAAGGTCAAG GGGGACGCCA
AGAATAGCAA ACCGCTTGCT GCGTCGTGTC AGAGATGTTG CTCAGGTGAG TGGCGAGGTG
CTCGTAGGGC AAAAAGTTGC TCAAAGGGCG CTAGATATGT TAAGTGTAGA CAGTCAGGGC
TTTGATCACT TAGACAGACG TATGTTATTG ACTATGATAG AAAAGTTTGA CGGGAGACCA
GTTGGTCTAG ATAGCGTCTC TGCCGCATTA GGTGAAGACA AAGATACTAT TGAAGACGTC
ATTGAGCCGT TTTTAATTCA GCAAGGCTTT ATCATCAGGA CGCCAAGAGG TCGTCAGGTT
ACGAAGCGTG CTTATGAACA TTTTAATTAC CAACTACCTT CAGATTTTAA ATAG
|
|---|
| Protein sequence | MIEQDRIISA ELKGNDRQVD RAIRPQALAE YIGQPVVREQ MEIFIQAARQ RGEPLDHTLI
FGPPGLGKTT LANIIGNEMG AEVRTTSGPV LERAGDLAAL LTNLNEGDIL FIDEIHRLSP
AIEEVLYPAM EDYQLDIMIG EGPAARSIKI ELPPFTLVGA TTRAGLLTSP LRDRFGIVQR
LEFYDVESLT TIVARSAGKM GVELDQSGCF EVARRSRGTP RIANRLLRRV RDVAQVSGEV
LVGQKVAQRA LDMLSVDSQG FDHLDRRMLL TMIEKFDGRP VGLDSVSAAL GEDKDTIEDV
IEPFLIQQGF IIRTPRGRQV TKRAYEHFNY QLPSDFK
|
|---|
| |