| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2187 |
|---|
| Symbol | aspS |
|---|
| ID | 5367181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2465533 |
|---|
| End bp | 2467305 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640804532 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001341044 |
|---|
| Protein GI | 152996209 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000146204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.319945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGCC ATTATTGCGG CGAGTTAAAT GCTTCTAACA TTTCACAAGA AATTACCCTT
TGCGGTTGGG TTCATCGTCG TCGTGACCAC GGCGGAGTTA TTTTCTTAGA CGTTCGTGAC
CGCGAAGGTA TTACTCAGGT TGTTTTCGAT CCAGATCGTG CCGAAAGTTT TGCTCTTGCT
GACAGCGTTC GTAATGAATT TGTTGTTAAG CTTAAAGGTT TAGTGCGTGC TCGTCCTGAA
GGCACAGTAA ACCCAAATAT GAATACCGGT GAAATCGAAG TATTAGGGAC GGAACTTGAA
ATACTAAATG CTGCAAAAAC GCCACCATTT CAGCTAGATG AGCACCAATC AGTAGGCGAA
GATGTACGAT TAAAAAATCG TTTCATCGAT TTACGTCGCC CTGAAATTCA ACAAAAAATG
CGTTTCCGTT CAAAAGTAAC ATCTGTATTA CGCCGCTACT TAGATGGTAA TGGTTTCCTA
GATATCGAGA CACCTATTCT AACTCGCGCA ACGCCAGAGG GTGCCCGTGA CTATTTGGTA
CCAAGCCGAA CGCAGCAAGG TAGTTTCTTT GCATTGCCTC AGTCTCCACA GTTGTTTAAG
CAATTGTTAA TGGTGTCTGG TTTTGATCGT TATTACCAAA TCGCAAAATG TTTTCGTGAT
GAAGATTTGC GTGCGGATCG CCAACCAGAG TTTACTCAAG TGGACATCGA AACATCGTTC
ATGAGTGAAC AAGAAATCAT GGCAATGACG GAAGAAATGA TCGTTGGCTT GTTTAAAGAG
CTAATGGATA TTGATTTGGG AACTTTCCCT CGCATGCCTT ATTCTGAAGC AATGGAAACT
TATGGCAGCG ATAAGCCGGA TCTTCGTATT CCGCTTACAA TAGTAACTGT TTCTGATTTG
ATGGCTGGCG TTGATTTCAA AGTCTTCTCT GGCCCAGCGA CGGATCCTAA AGGTCGTGTT
GCCGCTCTTA AAGTGCCTGG CGGTAACGCC TTAACTCGTA AGCAAATTGA CGATTACACT
AAATTTGTTT CGATTTACGG TGCGAAAGGC TTGGCTTACA TCAAGGTTAA TGACAAATCT
AACCTTGAAG AAGGTTTGCA ATCTCCGATT GTTAAGTTCC TTCCAGTTGA AGTTCGTGCA
GCTTTGCTTG AGCGCTTGGA AGCTGAAGAT GGTGATTTGA TTTTCTTCGG TGCTGACTCG
GCTAAAATAG TAAATGAGGC ACTTGGTGCA TTGCGTTGCA AGCTAGGTGA TGATTTGAAC
CTATATACTT GTAAGTGGGC ACCTTTGTGG GTTGTTGATT TCCCAATGTT TGAAGAAACA
AGTGATGGTG GCATTACTGC TATTCACCAC CCATTTACGG CACCTTCTTG CTCACCTGAA
AATTTGAAAG CGAGCCCATT AACGGCATTA TCACAAGCTT ATGACATGGT TTTAAACGGC
ACTGAGCTTG GTGGTGGTTC TATTCGTATT CACCAGTCAT CAATGCAAGA AACAGTATTT
GAACTACTTA ATATCACTAA AGAAGAGCAA GAAGAGAAGT TTGGTTTCTT ATTGGATGCG
CTTAAGTTTG GCGCGCCACC ACATGGTGGT TTAGCCTTTG GTCTAGATCG TCTTGTGATG
CTAATGACTG GTTCTAGTTC TATACGTGAT GTTATTGCTT TCCCTAAAAC GCAAAGTGCT
ACTTGTCTAT TGACTCAAGC GCCAGGCGAA GTAAGCGAGA AGCAATTAAA AGAATTGAAT
ATCCGCATTA GAAAACCTGT TGTTGAATCA TAG
|
|---|
| Protein sequence | MRSHYCGELN ASNISQEITL CGWVHRRRDH GGVIFLDVRD REGITQVVFD PDRAESFALA
DSVRNEFVVK LKGLVRARPE GTVNPNMNTG EIEVLGTELE ILNAAKTPPF QLDEHQSVGE
DVRLKNRFID LRRPEIQQKM RFRSKVTSVL RRYLDGNGFL DIETPILTRA TPEGARDYLV
PSRTQQGSFF ALPQSPQLFK QLLMVSGFDR YYQIAKCFRD EDLRADRQPE FTQVDIETSF
MSEQEIMAMT EEMIVGLFKE LMDIDLGTFP RMPYSEAMET YGSDKPDLRI PLTIVTVSDL
MAGVDFKVFS GPATDPKGRV AALKVPGGNA LTRKQIDDYT KFVSIYGAKG LAYIKVNDKS
NLEEGLQSPI VKFLPVEVRA ALLERLEAED GDLIFFGADS AKIVNEALGA LRCKLGDDLN
LYTCKWAPLW VVDFPMFEET SDGGITAIHH PFTAPSCSPE NLKASPLTAL SQAYDMVLNG
TELGGGSIRI HQSSMQETVF ELLNITKEEQ EEKFGFLLDA LKFGAPPHGG LAFGLDRLVM
LMTGSSSIRD VIAFPKTQSA TCLLTQAPGE VSEKQLKELN IRIRKPVVES
|
|---|
| |