| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2143 |
|---|
| Symbol | |
|---|
| ID | 5364781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 2418003 |
|---|
| End bp | 2418884 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640804488 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001341000 |
|---|
| Protein GI | 152996165 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.168982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.25781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACAG GTAGTTTAGT TGCGCTTATT ACACCTATGT CACCAGATGG CGCTGTAGAT
ACTAAAAAAT TAGATGATCT AATAGAGTTT CACATTAACG AGGGTACTCA CGGAATCGTA
GCTGTAGGGA CCACGGGTGA ATCTTCCACT CTTACACCGG TAGAACATGC TAATGTAATT
CGTCAGGTTG TTAATACGGT TAATGGCCGT GTTCCTGTTA TTGCTGGCAC TGGTGCAAAC
GCAACACATG AAGCCATCGA CCTTACTCGT AGTGCTAAAG AAGCTGGCGC AGATGCCTGC
TTACTTGTTA CTCCTTATTA CAACAAACCA ACACAAGAAG GTTTGTATCA GCATTTTAAA
GCGATAGCAG ATGCAGTTGA TATTCCTCAA ATTCTATATA ACGTACCAGG TCGTACTGCT
TGCGATATGC AAAATGATAC CGTTGTGCGT TTAGCTTCGG TTAAGAATAT TGTTGGTATA
AAAGACGCCA CTGGTAATTT AGAACGTGGG GAGGCATTAA TTAAAGCCTT ACCAGAAAGT
TTTGCTGTAT ACTCTGGAGA TGATCCAACA GCAGTTTCAT TGATGCTTTT GGGTGGTAAA
GGTAATATTT CCGTTACGGC AAATGTAGCG CCTAAAGCCG TTGCCCAAGC AGCTGAATTA
GCATTAGCTG GACAAGCAGA TCAAGCACAT TCAATTGATA CAACGATTTC TTCGCTTCAT
AAAAATTTAT TTTTAGAATC TAATCCTATT CCTGTCAAAT GGGCTTGTAG CCAACTAGGA
CTATGTGAAG AAGGAATTCG ATTGCCGCTT ACCCCCCTTT CTGAACAGTA TCATTCAGCC
GTACGACAAG CCATGATAGA AGCTGGAGTT TTATTAGTAT GA
|
|---|
| Protein sequence | MITGSLVALI TPMSPDGAVD TKKLDDLIEF HINEGTHGIV AVGTTGESST LTPVEHANVI
RQVVNTVNGR VPVIAGTGAN ATHEAIDLTR SAKEAGADAC LLVTPYYNKP TQEGLYQHFK
AIADAVDIPQ ILYNVPGRTA CDMQNDTVVR LASVKNIVGI KDATGNLERG EALIKALPES
FAVYSGDDPT AVSLMLLGGK GNISVTANVA PKAVAQAAEL ALAGQADQAH SIDTTISSLH
KNLFLESNPI PVKWACSQLG LCEEGIRLPL TPLSEQYHSA VRQAMIEAGV LLV
|
|---|
| |