| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2114 |
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| Symbol | |
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| ID | 5364952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 2391644 |
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| End bp | 2394271 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640804459 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001340971 |
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| Protein GI | 152996136 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000002449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGAAAAT CACTGGTTAT CGTGGAATCG CCGGCTAAGG CGAAAACCAT CAACAAATAC
CTGGGCAACG ACTTTATTGT CAAATCTAGT GTCGGGCACA TACGTGACCT GCCTTCAGGT
ACAACTGCCA CCTCTACGCC TCAAGAGCGA GCAAAGCAGG CTGCTTTGAC GCGTAAAATG
AGTCCGGAAG AAAAACTTGA GTATAAAAGT AGCAAAGCGC GCAAACAGTT GATTTCTAGA
ATGGGTGTTG ATCCAGAAAG TAACTGGAAA GCTCATTACG AAATTCTGCC AGGTAAAGAA
AAAGTTGTTG ATGAACTAAA GCGTTTAGCA AAAAATGCTG ACACCATCTA TCTCGCAACC
GATTTGGATA GAGAGGGGGA GGCAATTGCT TGGCATTTAC GAGAAGCCAT TGGTGGCGAT
GATAGCCGCT ATAAGCGTGT AGTATTTAAC GAGATTACAA AAAAAGCCAT TAAAGCTGCG
TTTGAAACCC CATCTGAATT AGACATGGAT CGTGTAAACG CTCAACAGGC TCGTCGTTTC
TTGGATCGAG TAGTTGGTTT TATGGTGTCA CCGCTACTTT GGTCAAAAGT GGCGAGAGGT
TTGTCTGCGG GGCGAGTTCA GTCTGTTGCA GTTCGTTTGA TTGTTGAGCG TGAAAAAGAA
ATTCGTGCAT TTGTTCCTGA TGAGTTTTGG GAATTAGACG CAATGCTTGC GACGCCATCG
AAAGAAGTTA TTAAATTCGA GGCAGCAAAA TACCAAGATA AAGAATATCG ACCAGTCAAT
AAAGCACAGT CAGATGAGCA CGTAGCTCGT TTAAATGATG CTAAATACCT TGTAAGTAGC
CGTGAAGATA AGCCGACTAG CAGTAAGCCG TCAGCTCCAT TCATTACATC TACTCTTCAG
CAAGCAGCTA GCACTCGTTT GGGGTATGGC GTTAAAAAGA CCATGATGCT GGCTCAGCGT
CTGTATGAGG GTGGTTACAT TACCTACATG CGTACTGATT CGACAAACTT AAGTGTTGAT
GCTGTAGAGG CGCTAAGAGG ATATATCCTT TCTAAATTTG GCGAGGCCTA TCTGCCAGCT
GAACCTATTC GATATAGCAG TAAAGAAGGT GCTCAAGAGG CTCACGAAGC GATTCGTCCA
TCTGATGTGA ATGTTCGAGT AGATGATTTA CAGGGTATGG AAAAAGATGC CCATCGTTTA
TACGATTTGA TCCGTAGTCA ATTTATGGCC TGTCAAATGA CACCAGCCGA ATATACTTCG
ACAACAATCA CAGTAACTTC AGGCGATTAC GAATTCAAAG CGAAAGGCCG AATTTTACGT
TTTGATGGTT ACACGCGCGC GATGCAGGCA GTCGCGAAAA AAGGTGAAGA CAACATTTTG
CCAGATGTTG GGCAAGGGGA ATATCTGACT CTTAAAGAGT TGTTGCCAGA ACAGCATTTT
ACCAAGCCTG TTGCTCGATT TAGTGAAGCG AGTTTGGTTA AAGAGCTTGA AAAACGTGGT
ATAGGTCGTC CTTCAACTTA TGCTTCTATT ATTTCTACGA TCCAAGATCG TGGTTATGTG
CGAGTTGAAA ATCGTCGTTT TTATGCAGAA AAAATGGGCG ATATAGTAAC TGAACGTTTG
GTTGATAGTT TTAGTTCTTT GATGAACTTT AGCTTTACGG CACAAATGGA AGAGCAGTTA
GATGATATCG CTGAAGGGCA TAAAGACTGG ATTAAGACAC TTAATGCTTT CTATAAAGAT
TTTAGTTCTG TACTTGCTAA AGCAGAGTCG CCAGATGGCG GTATGATGCC AAATGAGCCA
ACGCCGACAG ATGTTGAATG TCCAACTTGT TCTCGTCCAA TGCAGATTCG TACAGCCAGT
ACAGGTGTAT TTATGTCCTG CTCTGGTTAT GCGTTACCAC CAAAAGAGCG TTGTAAAGCA
ACGATTAATC TAACCCGTGG TGATGAGGCG ATTCCTGTTG ATGACGAAGA GGGAGAATCT
AAGGCTCTAA TCAATAAGCA TCGTTGTAAA ATCTGTGGTT CAGCCATGGA CAGCTATTTG
ATGGATGAGC ATCGCAAACT ACATGTTTGT GGTAATAATC CGGCTTGTTC TGGTTATGAA
GTCGAGACAG GTGCTTTTAA AATTAAAGGT TATGATGGTC CTACATTAGA GTGTGATAAA
TGTGGTTCGG AAATGCAGCT GAAAACGGGT CGTTTTGGTA AGTATTTTGG TTGTACTAAT
GAAGGCTGTA AAAATACTCG TAAGTTATTG AAGAACGGCG AAGCTGCGCC ACCTAAGATG
GATCCTGTGC CAATGCCAGA TCTTGCTTGT CAAAAAGTAG ATGATCATTA TGTGCTTCGC
GATGGCGCAA CGGGTTTATT CTTAGCAGCC AGTCAATTCC CACGCAAGCG TGAAACTCGT
GCCCCATTGG TTGAAGAATT GCTTCCATAT ATGGATCAAA TAGATCCTAA ATATCATTTT
TTTGCCAAAG CGCCTAAAAA AGATTCTGAA GGTCGCCCAG CCATCATTCG ATATAGCCGT
AAGACGAAAG AGCAATATGT CATGACGGAA GAAGAAGGCA AGCCAACAGG CTGGAAGGCA
TTTTATGTCG GCTCTAAATG GGTGATTGAG GAAGGTAAGA AAAAATGA
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| Protein sequence | MGKSLVIVES PAKAKTINKY LGNDFIVKSS VGHIRDLPSG TTATSTPQER AKQAALTRKM
SPEEKLEYKS SKARKQLISR MGVDPESNWK AHYEILPGKE KVVDELKRLA KNADTIYLAT
DLDREGEAIA WHLREAIGGD DSRYKRVVFN EITKKAIKAA FETPSELDMD RVNAQQARRF
LDRVVGFMVS PLLWSKVARG LSAGRVQSVA VRLIVEREKE IRAFVPDEFW ELDAMLATPS
KEVIKFEAAK YQDKEYRPVN KAQSDEHVAR LNDAKYLVSS REDKPTSSKP SAPFITSTLQ
QAASTRLGYG VKKTMMLAQR LYEGGYITYM RTDSTNLSVD AVEALRGYIL SKFGEAYLPA
EPIRYSSKEG AQEAHEAIRP SDVNVRVDDL QGMEKDAHRL YDLIRSQFMA CQMTPAEYTS
TTITVTSGDY EFKAKGRILR FDGYTRAMQA VAKKGEDNIL PDVGQGEYLT LKELLPEQHF
TKPVARFSEA SLVKELEKRG IGRPSTYASI ISTIQDRGYV RVENRRFYAE KMGDIVTERL
VDSFSSLMNF SFTAQMEEQL DDIAEGHKDW IKTLNAFYKD FSSVLAKAES PDGGMMPNEP
TPTDVECPTC SRPMQIRTAS TGVFMSCSGY ALPPKERCKA TINLTRGDEA IPVDDEEGES
KALINKHRCK ICGSAMDSYL MDEHRKLHVC GNNPACSGYE VETGAFKIKG YDGPTLECDK
CGSEMQLKTG RFGKYFGCTN EGCKNTRKLL KNGEAAPPKM DPVPMPDLAC QKVDDHYVLR
DGATGLFLAA SQFPRKRETR APLVEELLPY MDQIDPKYHF FAKAPKKDSE GRPAIIRYSR
KTKEQYVMTE EEGKPTGWKA FYVGSKWVIE EGKKK
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