| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_2039 |
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| Symbol | |
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| ID | 5365571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 2310234 |
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| End bp | 2312468 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640804384 |
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| Product | Tfp pilus assembly protein FimV-like protein |
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| Protein accession | YP_001340896 |
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| Protein GI | 152996061 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.177645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGAA AAACCCTCGT TAGTATTGCT GTGTCAGGTG CGCTATATGT GTCCAGCAGT
TACGCATTGG AACTGGGTGA GTTGACCTCT CAATCAAATT TGGGCGAGCC TTATCGCGGG
AAAATTGAAC TTTCTGATGT TGGGTCTTTA ACAAACAATG ATATATTGAT TCGTCTTGGT
AGCGAAAGTG AATTTCGTCA AGCTGGCTTT GCTCAGACAA GAGTTTTATC ACAGCTGAAA
TTTGACGTTG TGCGTGAAGG TGGTAATCTC GTTGTGGCTG TGTCATCTGA TCAGCCATTA
CAAGTAGATG AGTTGCGCTT TATTTTGGCT GCTCGTTGGC CTAGTGGCCA GGTTGTTAGA
GAATATCAAG CTCCATTAAA CCAATCTGCA TTGGTTGAAA AATCTCAAAA AGAAGTCGTT
CAATCTACTC CTGTTGCATC CTCTTCTGCT TCTGCTATCT CAAGTCAAGT TGTCTTCCGT
AAAGCAACTA TTGCTGCAGA GAAGCTATCT TCTAAAGGTC AGCTCAATGT GGCCAAAGGA
AATACCCTCT GGTCTATTGC GGGGCAAAAT CGTCCTTCGA ATCAGCTGAC CATTTATCAA
ACAATGATGG CGATACAGGC ACTTAATAAA GACGCTTTTT ATTCAGATAA TATAAATTTA
TTGAAAGAAG GTGCCATTCT GCGTTTGCCA ACTCAGGATC AAATTGCACT TTTTAACAAA
ACAATTTCAG AAACAGAGTT TAAGCGTCAG CATGATGCTT GGATGGCCCT GAAAGGTTCC
AAAGGTAATA CTGCTATAGA GCAAGCTCAA TTAAATACTC AGGCGAAAGC TAAGGCTGCG
GCTAATGCTC CTGCAGCTGA TGGTGATAAA TTGACCTTGG CTTCTGGACA AAGTTTATTA
CCTGAAAATA CTGCGAGTTC AAATGCCGGG GATGATAAAA GTGCTGCCTT AAATGCTCTG
CAAGGGGAGT TATCTGCCTC ACAGGAAATG TTAGACAAAG AGCGACGTGA AAAAGGTGAA
TTATCAACTC AATTAGGCGA TTTGAACAAA CAGCTTGAAA CTCTTGAGAA GCTAATTAGT
TTAAAAGATA AACAAATGGC AGATTTGCAG CAGCAATTTG CCAGCGCTCA GCAGGCTCTT
CAAGAGCAAA AGAATACTGT TGATCAGCTT TTAGAGGCAG ATCAAATACG TCGAGAGAAA
GAATTGGCGG AAGAGTCATC TCTTGTTAAC AAGATATTTG GCAATCCAAT CGTTGTATCG
ATAGGTGCAG TTGTGTTGCT GCTATTTGGT TTCTTGATTG GGCTAGTAAT GCGAAGAGCT
GGCAAGAAGC AAGAGAAACA AGACTCATTA AAAAAGGATG AATTTGATCT CTCTTCAGCA
GGGGGTGTCG CGCCAGTTGC TGTCGCTGCG GCAGCAGATT ATGCATTAGA CGATGAAATT
GAAGAGAAAG AAGAGTTAAA AGAAGAAGAT CCTTTCGCTT TTGATTTTGA TACGCCAGAT
GAAGATGATG ATCTTGAAGA TTTTGGTTCT TTTGGGGACG ATGTAGCTTC TGTAGAGTTT
ACTGATCAAA TGGTCGATGA CGAAATAGAC TTGTCTGAAG ATCCAGAAGA TGAACTTGAA
AGTGCAGCAG AAGATGATGC TATTGACGAT GACATGTTTG CGTCTTTTGA TGAGCCAGAT
GATTTGTCTG ATCCAGTGTT AGATTTTGGT GAAGATGATG AGCTAGATGA ACTGGAAACC
TTTGCTGAAG ATGATATACC AACAATGACA CCAGAAGCTG CAGAGCCGGC TTCTGATGAG
GTGGAGGATG AAGCCGAAAG CGAAGAAGAG TCTTTTGTTT CGAGTCTATT GAATGATGTT
GATCAAGATG ATGTTGATCA AGATGATGTT GACGAATCGT CTATCTTTAG TGGTACTCCA
AATGATTCTT TGGCTAACTC AATAGAAGAA ACATTAGCTG AGGCTCAGCA GGAGGAAGAT
GAAATAGAGG TTCCTTCATT TGGCGAGGCT GAAGCGGCTG CAGATGAAGA AGTTAGCGAT
GAAGAGGAAG AGTTCGACTT CTTTGATGCT AGTGGTGATG AGGTTGCAAC CAAGCTTGAT
TTAGCAAGAG CCTATATGGA TATGGGGGAT GAAGAGGGTG CTCGAGTTAT TCTGGATGAT
GTTATTGAGT CAGGTAATGA ACAGCAAATT GCTGAAGCAC AGAATATGAT GGAGCGAATG
TTCCCAAGTG ACTAA
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| Protein sequence | MLRKTLVSIA VSGALYVSSS YALELGELTS QSNLGEPYRG KIELSDVGSL TNNDILIRLG
SESEFRQAGF AQTRVLSQLK FDVVREGGNL VVAVSSDQPL QVDELRFILA ARWPSGQVVR
EYQAPLNQSA LVEKSQKEVV QSTPVASSSA SAISSQVVFR KATIAAEKLS SKGQLNVAKG
NTLWSIAGQN RPSNQLTIYQ TMMAIQALNK DAFYSDNINL LKEGAILRLP TQDQIALFNK
TISETEFKRQ HDAWMALKGS KGNTAIEQAQ LNTQAKAKAA ANAPAADGDK LTLASGQSLL
PENTASSNAG DDKSAALNAL QGELSASQEM LDKERREKGE LSTQLGDLNK QLETLEKLIS
LKDKQMADLQ QQFASAQQAL QEQKNTVDQL LEADQIRREK ELAEESSLVN KIFGNPIVVS
IGAVVLLLFG FLIGLVMRRA GKKQEKQDSL KKDEFDLSSA GGVAPVAVAA AADYALDDEI
EEKEELKEED PFAFDFDTPD EDDDLEDFGS FGDDVASVEF TDQMVDDEID LSEDPEDELE
SAAEDDAIDD DMFASFDEPD DLSDPVLDFG EDDELDELET FAEDDIPTMT PEAAEPASDE
VEDEAESEEE SFVSSLLNDV DQDDVDQDDV DESSIFSGTP NDSLANSIEE TLAEAQQEED
EIEVPSFGEA EAAADEEVSD EEEEFDFFDA SGDEVATKLD LARAYMDMGD EEGARVILDD
VIESGNEQQI AEAQNMMERM FPSD
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