Gene Mmwyl1_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_2016 
Symbol 
ID5368000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp2283510 
End bp2284736 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content40% 
IMG OID640804361 
Productextracellular solute-binding protein 
Protein accessionYP_001340873 
Protein GI152996038 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00148299 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TACAATCCTT ATTAGTAGGG GTAATGGCAT TAGGTGCTGT CTCTATTACT 
AATGCTGGTA CCTTGGTGAT TAACTCTGAT CAAGCAGATC CAGCGCCAAA GAAAGCGTTC
ACTGAAATGG TGCAGAAGTT CGAAAGTGAA AACCCTGACA TTACAGTGAA ATACAACCTA
TATGACAAAG AAGGTTATAA AACGGCTATT CGTAATTGGC TTTCCACTAC GCCACCAGAC
ATTGTTTTCT GGTATTCAGG CAATCGTATG AAAAGCTTTG TTGACCGTGA TTTGTTTGAA
GATGTTAGTG ATATTTGGCA AAAACTCGGT TTGAAAGAAA TTATGCCTGC AGCGACTGCC
GCTTCTACAT TGAACAATAA GCAATGGGGC ATTCCCTACA GTTATTATCA ATGGGGAATT
TATTACCGTA AAGATATCTT TGACAAGTTA GGTTTGTCTG AACCTAAAAC GTGGGACGAA
TTTCTTGCTG TCAACGCGAA GCTAAAAGCC AATGATGTTA CTCCTATTAC AATAGGCACT
AAGTATTTAT GGACAGCAGC GGGTTGGTTT GATTACTTGA ATTTGCGTAC CAATGGTTTG
GATTTTCATA TCGATTTGAT GGACGGTAAA ATTCCTTATA CAGATCCTCG GGTTCGTAAG
ACGTTTGAGC ATTGGAAAGA ACTTATTGAT AAAGGTTATT TCCTAGAAAA CCATGCTTCT
TATTCTTGGC AAGAAGCGCA GCCATTTATG TACAACGGCC AAGCAGCCAT GTACTTGATT
GGTAACTTTA TTGTGCCAAA CTTCCCTAAA GAACTTGACG GTAAGATGGG CTTCTTCCAA
TTTCCTACCA TTGATCCAGC CATTCCCATT GCCGAAGATG CACCAATGGA AACAGTTCAT
ATTCCAGCAA AAGCAAAAAA CAAAGTTGAT GCACGGAAAT TCTTGGAGTT CATGGCACGT
GCCGATAATC AAACTATGCT AAATGCTGTC TTGTTACAGA TTCCACCTAA TATTAAAGCG
AAAGCTCCGG ATGACTTTTT CTTGAATAAA GGTGTAGCAA TGTTAAACAG TGCTGCTGGT
ACCGCTCAGT TCTATGATCG TGATACTGAT CCAAGCATGG CTCAAGAAGG CATGAAAGGT
TTCCAAGAGT TTATGGTAAA ACCAGAGCGT CTTGATGCAA TCCTTAAACG ATTAGAAGGC
GTGAGAAAAC GCGTTTTCAA AAAATAG
 
Protein sequence
MKKIQSLLVG VMALGAVSIT NAGTLVINSD QADPAPKKAF TEMVQKFESE NPDITVKYNL 
YDKEGYKTAI RNWLSTTPPD IVFWYSGNRM KSFVDRDLFE DVSDIWQKLG LKEIMPAATA
ASTLNNKQWG IPYSYYQWGI YYRKDIFDKL GLSEPKTWDE FLAVNAKLKA NDVTPITIGT
KYLWTAAGWF DYLNLRTNGL DFHIDLMDGK IPYTDPRVRK TFEHWKELID KGYFLENHAS
YSWQEAQPFM YNGQAAMYLI GNFIVPNFPK ELDGKMGFFQ FPTIDPAIPI AEDAPMETVH
IPAKAKNKVD ARKFLEFMAR ADNQTMLNAV LLQIPPNIKA KAPDDFFLNK GVAMLNSAAG
TAQFYDRDTD PSMAQEGMKG FQEFMVKPER LDAILKRLEG VRKRVFKK