Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1857 |
Symbol | |
ID | 5365685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 2101933 |
End bp | 2102901 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640804204 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_001340716 |
Protein GI | 152995881 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.566225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00271003 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTATA AAAATAAAAT CATGAGACTA ATCGCAGTGT TTACTATGCT GTTTGCCTTT GTTGGCACAA GCTACGCTGC AAAATACAAA ATTGGTATAA GTGTGCCATC TGCAGACCAC GGTTGGACTG CGGGGCTACT TTGGTGGGCA AATAAAGCAG CGGCAGATTT AAAAGCAAAA GAAAAAGACA TCGAATTTTT CGTCGTTGCG TCAAGCTCGG GTTCAAAACA AGTGGGCGAT GTTGAAGACT TAATGATCAA AGGCATTGAT GCTTTGGTTA TCCTTCCTCA TAACCCAGCC ACCTTACAAA AGGTCATTGA AGAAGCCTAC GACGAAGGTA TTTACACCGT TGTGGTAGAC CGGGAACTTG CCCATCCGGC TCAAAATGTC TTCATTGCTG GAGATAACGC CGGTCTAGGT CGTGTAGGTG CACAATGGCT AGCTAAAGAA ATGTCTGGCA AGGGCAATGT TGTAGTGATT GAAGGGCTAC AAATTCCTAT CAACAAGCAA CGTGTTGATG CTTTTAACGA CGTTATTGCT GGATACCCAA ATATCAAGAT CCTTGATTCT CAACCAGGTG ATTGGTCTAC ACAAAAAGCG CTATCAGTGA TGGAAAACTT CTTGCAGAAG CATCCTAAAA TTGACGCTGT ATGGTGCCAA GATGACGACA TGCTGAAAGG TGTTTTAAAA GCCATTGAAG AATCAGGCCG CACAGACATC AAAACTGTAT TGGGTGGCGC TGGCTCTAAA GACATTATCG AGATGATTCA ATCAGGTAAT AAAATGGTAC GTGCAACCGT CACTTATAGC CCATCTATGA TTGCGTCCGG CATTGCTCTT GCTGTTCATG GCGTCAAACA CGAAAAACTT GGTTATTTAT ACCACGAACC ATCTCGCGTC ATTTTAGGCG CAGACTTGGT GACAAAAGAA AACGCTGCGG ATTATTACTT TAAAGACGCC GCTTACTAA
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Protein sequence | MKYKNKIMRL IAVFTMLFAF VGTSYAAKYK IGISVPSADH GWTAGLLWWA NKAAADLKAK EKDIEFFVVA SSSGSKQVGD VEDLMIKGID ALVILPHNPA TLQKVIEEAY DEGIYTVVVD RELAHPAQNV FIAGDNAGLG RVGAQWLAKE MSGKGNVVVI EGLQIPINKQ RVDAFNDVIA GYPNIKILDS QPGDWSTQKA LSVMENFLQK HPKIDAVWCQ DDDMLKGVLK AIEESGRTDI KTVLGGAGSK DIIEMIQSGN KMVRATVTYS PSMIASGIAL AVHGVKHEKL GYLYHEPSRV ILGADLVTKE NAADYYFKDA AY
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