| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1302 |
|---|
| Symbol | |
|---|
| ID | 5367202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1456552 |
|---|
| End bp | 1457073 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640803641 |
|---|
| Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| Protein accession | YP_001340166 |
|---|
| Protein GI | 152995331 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCGT TTCGTATTGG CCATGGTTTT GATGTTCATA AATTTGGCGA GGGTGACAAG
ATTGTCATCG GCGGTGTGTC CATTCCTTAT TCGCAGGGTC TTATTGCTCA TTCGGATGGT
GATGTGGCAT TGCACGCTTT AACAGATGCT TTATTGGGCG CGGCTGCTTT AGGTGATATT
GGAAAACATT TTCCTGATAC TGATGCTGCT TTTGCGAATG CTGATAGCCG AATATTACTC
AAGCGAGCCT ATCAAGAGGT ACAAGCTCTT GGTTTTAAGG TGGGTAATGT TGATGTCACC
ATTATTGCTG AGGCACCGAA AATGCGTCCT TATATTGATG CAATGCGTGC CAATATTGCC
AAGGACTTAG AAGTGGATAT AAGTGCTGTT AATGTGAAAG CAACGACGAC GGAAAAGCTA
GGCTTTACTG GTCGCAAAGA AGGTATTGCT GTCGAGGCGG TAGCGCTTAT TTTTAAACAA
GTTTTGTTAA ATAAAGTTCT TTCTAATCAA GGTAATATAT GA
|
|---|
| Protein sequence | MMPFRIGHGF DVHKFGEGDK IVIGGVSIPY SQGLIAHSDG DVALHALTDA LLGAAALGDI
GKHFPDTDAA FANADSRILL KRAYQEVQAL GFKVGNVDVT IIAEAPKMRP YIDAMRANIA
KDLEVDISAV NVKATTTEKL GFTGRKEGIA VEAVALIFKQ VLLNKVLSNQ GNI
|
|---|
| |