| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1252 |
|---|
| Symbol | |
|---|
| ID | 5367204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1403211 |
|---|
| End bp | 1404533 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640803591 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001340116 |
|---|
| Protein GI | 152995281 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0113803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.599775 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAAGAA GAACATCCCC ACGCCGAACA ACTACCTCTA AGCCGCAGCC TATTGGTCCA
ATACAGACCT TCGAAGTGGA CGGTTTGACG CATGAAGCAA AAGGCGTCGC TCGTTTACAA
GGTAAAGTAA CTTTTATTGA AGGTGCTTTG CCTGGTGAAA CAGTCGAGGC GCAAGTTAAT
AAAGCAGGGC GTCGCTTTGA TGAAGCTGTT TTGGTGAATA TTATTGAGCC GAGCGTTTAT
CGAGTTGAGC CCTCTTGTCA GCATTTTAAT CTCTGCGGTG GTTGTAGTTT TCAGCATTTA
GCTAATGAGC AACAGCTAAG TGCAAAAGCT GATTGGTTGC AAGGACAACT GCGTAATCTG
ATTACAACCC AAGAATTAGA GACCTTATCA GATACACCTA CAGGTTATCG TCGACGTGCT
CGTCTCGCGA TTGATATCAA AAAAGGCCGT ATGGTATTGG GTTTTCGTGG TAAAGCATCT
AAGGAAATTA TCTCAATTGA TCAATGTGTT GTGCTTACTC CTAATTTGCA AAGTACCTTC
CTTTTACTCA AACTCAAGTT ATTAGAAAAT GATTTGGCGG GTGTGCTTGG ACATGTGGAA
TTACTTGAAG ACACTAAAGG TGTTTCGGCG TTGTTTCGCT TAACGTCTCC AATATCTGAT
GAACTTAAAA ATGCATGGGA AGATTGGGCT GAAAAAGGGC GGGTCGCTTT ATATTGGCAA
GCACCAAAAG TGGGCAAGGC GGAAGTGGCG CTTGAAAAAA TGCGCTATTA TGATCTTGGT
GACTTAAGGT TGAAATATCA CCCTCAAGAC TTTATTCAAG TAAATGCTGC TATGAATCAA
AAGATGGTAG TGCAAGCAAT GGACTGGTTA AATCCAAGTA AGCAAGATGT AATATTGGAT
TTGTTTTGCG GCGTAGGGAA TTTTTCTTTA CCGCTAGCAG TGCATGCTCA AGCAGTTATT
GGTGTTGAAG TGCAAGAGAC AATGGTCGAA GCCGCGCGAG AAAATGCGCG AGTGAATGGT
TTTGATAACC TGTCGTTTGT GGCAGCAGAT TTGACTAAGC CTGTGAATAA TGAACTTTTT
AAGCAGACCA TTACCAAAGT ATTGTTGGAT CCTCCTCGTG CTGGAGCGTT TGAATTTTTA
GATAGCATAA TAAAAATTGG GCCGACGCAA ATATTGTATG TTTCTTGCAA TGCTTCTACT
TTAGCTAGGG ATGCCGAGTA TTTAGTTGCA AAGGGATATC GTGTTTTACG TGTTAGTTTG
ATGGATATGT TTCCGCAAAC CTCTCATGTA GAAACGATGA TGTTATTGCA AAAAAAGAAG
TAA
|
|---|
| Protein sequence | MRRRTSPRRT TTSKPQPIGP IQTFEVDGLT HEAKGVARLQ GKVTFIEGAL PGETVEAQVN
KAGRRFDEAV LVNIIEPSVY RVEPSCQHFN LCGGCSFQHL ANEQQLSAKA DWLQGQLRNL
ITTQELETLS DTPTGYRRRA RLAIDIKKGR MVLGFRGKAS KEIISIDQCV VLTPNLQSTF
LLLKLKLLEN DLAGVLGHVE LLEDTKGVSA LFRLTSPISD ELKNAWEDWA EKGRVALYWQ
APKVGKAEVA LEKMRYYDLG DLRLKYHPQD FIQVNAAMNQ KMVVQAMDWL NPSKQDVILD
LFCGVGNFSL PLAVHAQAVI GVEVQETMVE AARENARVNG FDNLSFVAAD LTKPVNNELF
KQTITKVLLD PPRAGAFEFL DSIIKIGPTQ ILYVSCNAST LARDAEYLVA KGYRVLRVSL
MDMFPQTSHV ETMMLLQKKK
|
|---|
| |