Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1209 |
Symbol | |
ID | 5365322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1352337 |
End bp | 1355885 |
Gene Length | 3549 bp |
Protein Length | 1182 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640803548 |
Product | ImcF domain-containing protein |
Protein accession | YP_001340073 |
Protein GI | 152995238 |
COG category | [S] Function unknown |
COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.177502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAC CTTTAGTTGG CCTATTAAAA AAACTCGTAC CCAGCCTTGT GGCGGCGCTG CCGTTTTTAA CCTTACTAAT AGTCATCCTA ATCAACCTTG CTATTTGGTT GACAGGGCCG TGGCTAATCA TAAACGAAGA GGCGCCATTG GCGTCTATTA GTGCTCGTTT ATTGACTATG GTTATTTTCT CTCTTGCCTG TTTGGCGGCT TGGGGACTAT TTCAGTGGCG TAAGCTCAAT GCTTATCACG CAGAACTTCA ACGTGAAGAA GAGCTGCGAG AAGACCCTGT AAAAGCGGCC GAAGAAAACC AAGAGGCCGA ATTAAATAAA GTCATGACTA ACATGCAAGA AAGCCTTAAT AAGCGTAACT ACCTTTATGC TTTGCCTTGG TATCTTGTCA TGGGGCTTGA AAATGCCGGT AAAACCAGCC TAATTAACCG CTCTGGTCAG GATTTTACTT TCTCCTCCAT TCTAAAATCT TCCGGAGAGG GCAGTAAAAA CGCCTATTCT TTTGATTGGT GGGTTGGTGA TACTTCTGTA TTGATTGATC CAGATGGCGA GTTATTGACG CAAGGCAAGA ATGTTTCTGA TCCAACTAGC GATGGCGTGA TGGAAAAACG CCTATGGGAA CATTTTATAC ATTGGCTTGA ACGAACTCGT AGTCGCCGCC CGCTGAACGG TATTGTATTA GCGCTTGATG TATCGAAATT AGCGACTTCA ACTATTTATG AAAGAAAAGC ATTTGCGACT ATTTTAAGGT CTCGAATCCG TGAGCTTATG GAAACCTTGT CCACTCGCTT GCCTGTGTAT GTGACCTTAA CCAAGTTAGA TTTGCTCTAT GGTTTTGAAC CATTCTTTAA AAATTACACG AAAGAACAGC GTGAAGAGGT ACTTGGTTTT ACCTTCTCGC TTTCCTCTGT TGATGACCAT GATAACTGGA TGAAGGAGTT TGATGCGGAA TACGAAGAGT TTATTAGCCG CGTTAATGCC ATATTGCCCC ACATAGTCGC TAAGAACATT AGTGATGAAG ATCGTAATGC TGTGTACAGC TTCACAAGAC AAATCAGTGG TTTAAAAGAC ATACTGTCAG TATTTTTCCA AGATGCGTTA AGTAGCGACC AATTCTCTAC TTCAGCATTG GTACGTGGAG TGTACTTTAC GTCTGTTTAT CAGCAAGGTG TTCCAACTAA CGCCTTTGAT GATGCCTCGT CACGACGTTA TGGTCTGACT CATGCCATAA ACAGTGCTCA AAATGCCAAA AACTCGACCA TGTACTTCAC CAAGAATTTG TTTAATAACA TTATTTATCC AGAAGCGGGT TTGGCATCGG ATAACTTCCG AGTGAGTAAG CAGAAAAAAC GCATTATGCT CTTGAGCACA GTGTCTTGTT CCATCATCTC TTTGATTCTG ATCGGATCAT GGCACCGTTA TTATTTAAAG AATATTGAGC AAGCGGATGC GGTATTGAGC AAGGTTAACT TGTACATGGA AGAGTATCCT GCGGATATGG ACTTGGTGTC TCAGAATGAG ATCTTACCGC CGTTGAATAC CATTCGTGAT GCGACTTTAG AGTTTGGTTT TTTCCGTGAT AAGCCAAGAT ACATTTCAGA TTTAGGTTTA TATCAAGGGC ATGCCATTGG TCCTCAAGTC GAAATGACGT ATCTGAATCT GTTGGAGTAC CGCTATCTAC CTTCTTTAAT GTTGGAGCTG GTCGCTGACC TTAAAAGCGC CGATACGGAT GAAAATAAGC TTTCAATATT GAGAGTTTAT CGAATGCTGG TGGACAAAAA CGGTCGTTAT GATGAGTTTG TACTGAATTA TTTTTCACGC AAGTGGCAAG TTAAATATTC CGGAAACAAG GCGATTCAAG ACAAGCTTTT ACAGCATTTA GCCTACGCGT TGCAGCATAC AGATCTCTAT GGGGCTCGCC TTGCTGGAGA TGAAAATGCC GATAAAGTAT TGCGACCTTA CGATAAGTTA ATCGCCACCA CCCAAGATGG TTTAAGCTCT TTGGCGATTG ATGAACGTGT TTACAGAAAC CTAAAACTGT CAGCGCAAAC TGCACTTGGT GCCGATCTTA ATATTCGTAC CTTGGTTGGT CCTTCATTCA ATCTAGTTTT CGATGAAAGA GAAATTGGCA GCGATAAACT GAATGTCCCT AAAGTCTTGA CCAAAGAAGG CTTTAAAAGC TATTTCCTAC CGCAATCTGA ATCCGTGTCT GATTTGGCTT TGATTGACAG CTGGGTGTTA GGACAAACGG AAACAGCGCA ATTCAGTAAA GCTGATAAGC AGGCATTGAA AGAAAAAATT AGAGATTCCT ATGTCAGTGA TTACACGAAT ACATGGCGAA ATGTTTTAAA TGAAATTGAT ATTAAGAACT TCTCTAATAT CAGCGAAGCC GTCGATGTAT TGGATAATCT AACCGGCAAT GGCAAACCTT TGCAGCGCTT GCTTGCTGCC TTAAGGGATA ACACCAAACT CTATCCTGAA ATTCCTGAGG ATGGAGAAGC GCGTGAAGAA ATGCTGAAAA GTGCTAGCTA CAACTTGGCT TCTAGATTGA ATGCGCCGTT TGCTGAGCTG AACCGTATTG TGGAATCTAA CGATGGTCAG CCAGCTTATA TTGATGAACT ATTGTTATCT ATTGAGCAAT TAAGAACTTA TCTTGCTGCA ATTCAAGATG CTCCTGATAT GGGACGTGCC GCATTAGAGA CGACTAAATC ACGAGCTTCA TTGAATAGTG TTGATCCAAT TTACACCCTT TCTAGGGTGG CGACAGGGCT TCCAAAACCT CTGGATTCTA TGATGTCTAA GCTGGCTGAT GAAAGTTGGT ATGTCATTAA GCAAGAAGCA ATTCGTTACT TAGAAGTGAG ATGGCATGAC GACATCTATA AAGTCTATGA GCAGAAATTT GCCGGACGCT ATCCGTTTGA TCCTAGCTCA AGTCGTGATG TGTCGTTGCA AGACTTTGAA GCCTTCTTTG CGCCAGACGG CATTTTAGAC CGATTCTATA ACGATCAGTT AAAAATGTTT ATTGATGAAA ACTCCAATAT CAATGGCGGT CATCATGGTA AATCATTGAT CCGTAAGGAT GTGCTTAAGC AGCTAGGAAA AGCAAAATTA ATTCAAGAAG CTTTCTTTAA TAGAAAAGGC ATATTGGATG TTAGCTTCGG CGTGGAGCCG ATCCTTTTAT CTGCGAATAA GCGAAGAGGC GTGTTGAATA TCGATGGTCA ATATTTATCT TACAGTCATG GACCAAGAAA TAATGTAGAA GTTATTTGGC CGAATACGCT AAGAGATAAC ACCACATCGA AATTGACCTT AGTGCCAACT GAGGCTAACG AGTCACCGCG TAGTATCTCA ACAGAAGGTC CTTGGTCGCT TTATCGTTTG CTTGATACAG CGAAAGTGGT GGGCGCTAGT GACTCCAGCG TGACTTATCA ATTTACGGTT GATAATGGCT ATATGGAAGT CAAAGTGAAT GCAACCACCT CCAATCCGTT TACTCAGCGC TTATTTAAAA ACTTCGAGCT GTCTAAAACC TTGTATTAA
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Protein sequence | MFKPLVGLLK KLVPSLVAAL PFLTLLIVIL INLAIWLTGP WLIINEEAPL ASISARLLTM VIFSLACLAA WGLFQWRKLN AYHAELQREE ELREDPVKAA EENQEAELNK VMTNMQESLN KRNYLYALPW YLVMGLENAG KTSLINRSGQ DFTFSSILKS SGEGSKNAYS FDWWVGDTSV LIDPDGELLT QGKNVSDPTS DGVMEKRLWE HFIHWLERTR SRRPLNGIVL ALDVSKLATS TIYERKAFAT ILRSRIRELM ETLSTRLPVY VTLTKLDLLY GFEPFFKNYT KEQREEVLGF TFSLSSVDDH DNWMKEFDAE YEEFISRVNA ILPHIVAKNI SDEDRNAVYS FTRQISGLKD ILSVFFQDAL SSDQFSTSAL VRGVYFTSVY QQGVPTNAFD DASSRRYGLT HAINSAQNAK NSTMYFTKNL FNNIIYPEAG LASDNFRVSK QKKRIMLLST VSCSIISLIL IGSWHRYYLK NIEQADAVLS KVNLYMEEYP ADMDLVSQNE ILPPLNTIRD ATLEFGFFRD KPRYISDLGL YQGHAIGPQV EMTYLNLLEY RYLPSLMLEL VADLKSADTD ENKLSILRVY RMLVDKNGRY DEFVLNYFSR KWQVKYSGNK AIQDKLLQHL AYALQHTDLY GARLAGDENA DKVLRPYDKL IATTQDGLSS LAIDERVYRN LKLSAQTALG ADLNIRTLVG PSFNLVFDER EIGSDKLNVP KVLTKEGFKS YFLPQSESVS DLALIDSWVL GQTETAQFSK ADKQALKEKI RDSYVSDYTN TWRNVLNEID IKNFSNISEA VDVLDNLTGN GKPLQRLLAA LRDNTKLYPE IPEDGEAREE MLKSASYNLA SRLNAPFAEL NRIVESNDGQ PAYIDELLLS IEQLRTYLAA IQDAPDMGRA ALETTKSRAS LNSVDPIYTL SRVATGLPKP LDSMMSKLAD ESWYVIKQEA IRYLEVRWHD DIYKVYEQKF AGRYPFDPSS SRDVSLQDFE AFFAPDGILD RFYNDQLKMF IDENSNINGG HHGKSLIRKD VLKQLGKAKL IQEAFFNRKG ILDVSFGVEP ILLSANKRRG VLNIDGQYLS YSHGPRNNVE VIWPNTLRDN TTSKLTLVPT EANESPRSIS TEGPWSLYRL LDTAKVVGAS DSSVTYQFTV DNGYMEVKVN ATTSNPFTQR LFKNFELSKT LY
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