Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1195 |
Symbol | |
ID | 5366889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1335440 |
End bp | 1335958 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640803534 |
Product | hypothetical protein |
Protein accession | YP_001340059 |
Protein GI | 152995224 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACGC CATGTTTTAT CTCGATCGAA GGGGAATCTC AGGGTCTTAT CACTGCTGGT GCCATGACAG TCGATTCTAT CGGTGACGTA GGCTTGGAAG GTCATGATGA CGAAATGCTG GTGCAACGCT TTGACCACAA CGTCACTGTA CCGACTAACC CACAGTCTGG TAACCCATCT GGTCAACGCG TACACAAGCC ATTCAAATTC ACCGTTGCTT TGAACAAAGC GGTTCCATTG CTTTACAACG CACTGTCTTC TGGCGAAAAA TTGCCAAAAG TGGAATTGAA ATGGTACCGC ACGTCTGCAG AAGGCAAGCA AGAGAACTTC TTCGTTACCG AACTAGAAGG CGCGGTCATC GTAGACATCC ATTGCGAAAT GCCACATTGC CAAGACCCAG CGATGGGCAA CTTCACACAG AACCTAACGG TCTCTATGGC TTACCGTAAG ATCACTTGGG ATCACATCAA CTCTGGTACG TCTGGTTCTG ACGACTGGAG CAAGCCAATC GAAGCGTAA
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Protein sequence | MPTPCFISIE GESQGLITAG AMTVDSIGDV GLEGHDDEML VQRFDHNVTV PTNPQSGNPS GQRVHKPFKF TVALNKAVPL LYNALSSGEK LPKVELKWYR TSAEGKQENF FVTELEGAVI VDIHCEMPHC QDPAMGNFTQ NLTVSMAYRK ITWDHINSGT SGSDDWSKPI EA
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