Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1157 |
Symbol | |
ID | 5365397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1289597 |
End bp | 1290955 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640803496 |
Product | sodium:neurotransmitter symporter |
Protein accession | YP_001340021 |
Protein GI | 152995186 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00156035 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAATA AAACATCTAT CCAAGGCTCG TGGGCGAGTC GATGGATATT CATTTTAGCG GCAACTGGTT CCGCTGTAGG CTTAGGCAAC ATCTGGAAGT TCCCTTACAT CACTGGTGAA AACGGTGGTG GGGCATTTGT TCTTGTTTAC TTGGTTTGTA TCTTGCTTGT TGGTATCCCA ATAATGATGG CTGAAGTCTT TATTGGGCGT CGTGCACGCA AAAACCCTAT AGATGCTTTA AGTGATGCAG CTGAAGAATC AGAAAGCTCA AAATCTTGGG GATTGATCGG TTTGATGGGA ATGCTATCTG GCGTTCTTAT CTTTTCATTT TATTCTGTTG TTGGTGGCTG GGTACTTTAT TACATTAAAG TCATGCTAAC AGGTGAAATG AATGGTATCT CTTCTGATGA TGCTGGTGCA GCCTTCGGCG CCCTTCTTGC AGAACCAACT ACACTTTTAG CTTGGCATAC TTTGTTTAGT ATCATGTCTG TTTTTGTTGT CGCTGCTGGC ATCAATAAAG GCATTGAAAC TGCGACTCGT ATTATGATGC CTGCCTTGTT TGTACTGCTA ATCATCCTAC TTGGCTATGC GATGACCACT GGTGGCTTTG CGCAAGGTTG GAATTTCATG TTCGAGTTTG ACTTCAGCAA GTTAACCTGG AACGCAGCTT TGATTGCATT AGGCCATTCG TTCTTTACCC TATCTTTGGG TATGGGCACC ATCATGGCTT ATGGCTCTTA CATGACCAAA GATGCGTCCA TAGGCAAGAC TGTATTGGCT ATAGGTGCAC TAGATACACT GGTCGCTTTG GTTGCTGGCT TAGCTATCTT CCCAATCATC TTCTCTAACG GTATGGATCC TGCAGCAGGC CCTGGCTTAA TGTTTATTTC TTTGCCAGTT GCCTTTGGTC AAATGCCTTT CGGTCAGTTG TTTGGTGTTT TGTTCTTTAT CTTAGTCGGC GTAGCTGCAT GGACCTCTGC GATTTCCTTG CTAGAACCTA CTGTTGCCTT CTTGGTAGAG CGCTTCAAAT TAAAGCGTAT CACAGCGTCT ATTGGCTTAG GCATCGTGGT CTGGGGATTA GGCATTGCAT GTCTAGGTTC ATTCAGCTTC ATGTCTGATG TAACCTTCTT CGGCAAAAAT ACTTTCGATT TCTTAGACTA CATTACAGCA AACATCATGC TGCCATTAGG CGGAATTTTG ATTGCACTGT TTGCAGGCTG GGTTGTTAAG AATAAGTTCT CACAAGATGA GCTAAACTTG TCTGACACTG TATTTAAACT ATGGAATTTT TCGATGAAGT TCACCGCGCC AATCGCAGTT GCTGTTGTAT TGTACTTCTT GATAAATCCT ATGAAGTAA
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Protein sequence | MTNKTSIQGS WASRWIFILA ATGSAVGLGN IWKFPYITGE NGGGAFVLVY LVCILLVGIP IMMAEVFIGR RARKNPIDAL SDAAEESESS KSWGLIGLMG MLSGVLIFSF YSVVGGWVLY YIKVMLTGEM NGISSDDAGA AFGALLAEPT TLLAWHTLFS IMSVFVVAAG INKGIETATR IMMPALFVLL IILLGYAMTT GGFAQGWNFM FEFDFSKLTW NAALIALGHS FFTLSLGMGT IMAYGSYMTK DASIGKTVLA IGALDTLVAL VAGLAIFPII FSNGMDPAAG PGLMFISLPV AFGQMPFGQL FGVLFFILVG VAAWTSAISL LEPTVAFLVE RFKLKRITAS IGLGIVVWGL GIACLGSFSF MSDVTFFGKN TFDFLDYITA NIMLPLGGIL IALFAGWVVK NKFSQDELNL SDTVFKLWNF SMKFTAPIAV AVVLYFLINP MK
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