Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1101 |
Symbol | |
ID | 5366439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1230378 |
End bp | 1230845 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640803442 |
Product | positive regulator of sigma E, RseC/MucC |
Protein accession | YP_001339967 |
Protein GI | 152995132 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3086] Positive regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.138854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAG AAACTGGAAG AGTATTATCC ATAGAAGATG GCTTCGCTAA CGTAGAAACG ATACGTACTA GCAGCTGCAC TTCGTGCCGG GCTCGTCATG GCTGTGGGCA TCATGCTATT GCTCAAGTGT CTTCCTCTAA TCGAATGCGT ATGCGAGCCA TTGATCCCTT GTCTGTTGAA GTTGGACAAA GTGTTGTCGT TGGAATTCCT GAAGATACTT TATTACAAGC TTCTGTTTGG ATGTATCTGA TTCCATTACT TGGTCTGGTT GGTGGCGCTG TTATTCCGTC TTTGTGGGGC GGTGAATCAG GCATTGCAGT TATTTTTTCT ATTATTGGTT TTGTTGGTGG TTTGTTATTA GCAAGAAACA AGTCAAAACA AGAAATGAAC AATCTTGATT ATTATCCCAA GATTTTAAGA ATTGAATCGC TTAACGATGA TCATATCCCT TTGGTTGCGA CATCTTAA
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Protein sequence | MIEETGRVLS IEDGFANVET IRTSSCTSCR ARHGCGHHAI AQVSSSNRMR MRAIDPLSVE VGQSVVVGIP EDTLLQASVW MYLIPLLGLV GGAVIPSLWG GESGIAVIFS IIGFVGGLLL ARNKSKQEMN NLDYYPKILR IESLNDDHIP LVATS
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