Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1089 |
Symbol | |
ID | 5366436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1218529 |
End bp | 1219425 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640803430 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001339955 |
Protein GI | 152995120 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.99301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00294409 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAACA CAGCCAAACG CATCACGCCA GAATATGAAA TTGTTGAAGA CAACGAAACC ATTCGTTATC TAGAACACGG CTATCCGTGC GATCTCATTC GTTGGCACGC TCACGATGAC TATGAACTGC ATTTTATCGT CGCCACTTCA GGAAAAGTCT TTGTGGGAGA TTACATAGGT AATTATTCAC CTGGCCAACT CATTTTAACT GGCCCTCGCC TCCCCCATAA TTGGATATGC CAAAAAGATC AGGAAGAGGT TCAACTACGA GATATGGTCA TTCGTTTTGA TCATGAATCC TTTTCCAATG GCATGAAAAT AATCCCTGAG CTCGCCGAGA TTCTACCTAT GCTGGCAAGG GCAAAGTCTG GCATTGAATT TTATGATCAG GACCATGAGT ACCTGAAAGA CGTATTTCAA AAAGTTCGTG ACTCCACTGG TTTATCAAGG CTCATTCTAG CGCTTCCTTT ATTGCAAAAA CTGGCCCAGA GCCGGAGTTA TCGCTTACTT TCTACGGTAC AAATCGACTT AAAATCCAGC GAAACCTTGC AACGTAAAAT CAATACCGTG GTCGATTACG TGTCTCAGAA TTACAGCCAA GACATTACGC TATCGAGCGT GGCAAGTTTG ATCGGCATGT CAGACAGCCA TTTTTCACGC TTCTTTAAAA AAGCGACAGG TAACCGTTTT ATCGAATTTG TGAATCGAGT GCGTGTGAGT CGCGCGTGCA GCCTGCTGAC GGAGACAGAT CAACAAATAG CCACTATTTG CTTTCAGGTT GGTTTCAATA ATGTCGCTAA CTTTAACCGC CGATTTCATG AGCTGAAAGG GGTAACGCCA AGAGACTTTC GTACTCAAAG CAATATCCAT ATTGAAGGCA TTGCGCCCGT TTCATAA
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Protein sequence | MQNTAKRITP EYEIVEDNET IRYLEHGYPC DLIRWHAHDD YELHFIVATS GKVFVGDYIG NYSPGQLILT GPRLPHNWIC QKDQEEVQLR DMVIRFDHES FSNGMKIIPE LAEILPMLAR AKSGIEFYDQ DHEYLKDVFQ KVRDSTGLSR LILALPLLQK LAQSRSYRLL STVQIDLKSS ETLQRKINTV VDYVSQNYSQ DITLSSVASL IGMSDSHFSR FFKKATGNRF IEFVNRVRVS RACSLLTETD QQIATICFQV GFNNVANFNR RFHELKGVTP RDFRTQSNIH IEGIAPVS
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