Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_1057 |
Symbol | |
ID | 5368733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1176233 |
End bp | 1176904 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640803392 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001339923 |
Protein GI | 152995088 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0312064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.484494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATT TTATCATTGC CCCTTCGATC CTTTCTGCCG ATTTTGCTCG ATTAGGTGAA GAGGTCGACA ATGTCTTGGA GGCCGGAGCC GACATCATAC ACTTTGATGT GATGGACAAT CATTATGTTC CTAATTTAAC GATTGGTCCT ATGGTCTGTA AAGCATTACG CAACCATGGC GTGACAGCGA ATATTGATGT CCATCTGATG GTGAAGCCAG TTGATCGCAT GATTGGAGAC TTTATTGAAG CTGGCGCTTC AATAATTACT TTCCATCCGG AAGCAAGTGA GCACATTGAT CGTTCTTTGC AAATGATTCG AGACGGTGGT TGTAAAGCTG GCCTGGTATT TAATCCAGCA ACTTCTCTTG AGCATTTAAA ATATGTGATG GATAAAATTG ATATGGTTTT GTTGATGTCA GTCAACCCAG GGTTTGGTGG GCAATCTTTT ATTCCCGGTA CTTTGGATAA ATTACGCGAA GCTCGTGCGT TGATTGATGC TAGCGGTTAT AACATTCGTC TTGAAGTAGA TGGCGGTGTT AGTGAAAAGA ATATTGCTGA AATTGCTCGT GCTGGCGCTG ATACCTTTGT TGCTGGTTCT GCTATTTTTG GTAAGGATGA CTACAAATCC GTGATTGATG CAATGCGTAA AGAGTTGGCG AGCGTACGTT AA
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Protein sequence | MNDFIIAPSI LSADFARLGE EVDNVLEAGA DIIHFDVMDN HYVPNLTIGP MVCKALRNHG VTANIDVHLM VKPVDRMIGD FIEAGASIIT FHPEASEHID RSLQMIRDGG CKAGLVFNPA TSLEHLKYVM DKIDMVLLMS VNPGFGGQSF IPGTLDKLRE ARALIDASGY NIRLEVDGGV SEKNIAEIAR AGADTFVAGS AIFGKDDYKS VIDAMRKELA SVR
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