| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_1029 |
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| Symbol | |
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| ID | 5364802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | + |
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| Start bp | 1146924 |
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| End bp | 1147850 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640803364 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001339895 |
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| Protein GI | 152995060 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0136597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAAG CAAAATGGCG TTCAGTAGAC GGTATCGTCC TACTGAACAA GCCGATAGGT
TTAAGTTCTA ACCAAGCGCT GCAGCGTGTC CGTCGCCTAT ATCAGGCAGC GAAAGCGGGT
CATACTGGCG CGCTTGATCC TTTGGCAACA GGTATGTTGC CATTGTGTTT AGGGGAAGCG
ACGAAATTTT CCCAATACTT ACTGGATGCA GACAAGCGTT ATTTAACCTG CATTCAATTA
GGGAAAAGAA CCACCACAGG GGATCGGGAA GGTGAGGTTT TGACGGAGGA TTCCGTTCCT
ACTTTAACCG ATGAGTCTCT TGAAGAAATT CTAAATGGTT TTCGTGGTGA GATTGAGCAA
ATTCCGCCTA TGTATTCCGC TTTAAAACAC GAAGGCAAAC CTTTGTATGA ATATGCTCGT
CAGGGTATTG TCATCGAAAG GAAGCGCCGT CGTGTTACTA TTTCAAATTT AACGCTTGTT
TCCAGAACTG AAGATACATT GACCCTAGAT ATTCAGTGTT CTAAAGGGAC TTATATTCGC
ACTATTGGCG AGGATATTGG TGAAGCGCTA GGTTGTGGAG CGCATTTACA CTCTTTACAT
CGTATTTCGA CAGCAGGTTA TTTGCCTGAG AATATGATGA CTTTGGAAGA GTTTGAAGCG
ATAGCGGAGC AAGGTTATGA CGCGTTAGAC GCGCATCTAA TCACAATGGA CACTGCCGTT
GAGCATTTTG CGAAAGTGGA ACTGCCTGAG TCGGACACAG TGAATATGAT GTTTGGTCGA
ACTGTTCCTA GTCCTGTTTC ATTAGAACAT GAAGCAGTGG TGAGAATGTA CGATCAGGGG
ACACAGCGTT TCTTAGGTCT TGGGCAAATT AAAGGTGCGT TTATTCGTCC TTATCGATTG
GTAAATACTA GCGAGTTCTC TTTATAA
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| Protein sequence | MVKAKWRSVD GIVLLNKPIG LSSNQALQRV RRLYQAAKAG HTGALDPLAT GMLPLCLGEA
TKFSQYLLDA DKRYLTCIQL GKRTTTGDRE GEVLTEDSVP TLTDESLEEI LNGFRGEIEQ
IPPMYSALKH EGKPLYEYAR QGIVIERKRR RVTISNLTLV SRTEDTLTLD IQCSKGTYIR
TIGEDIGEAL GCGAHLHSLH RISTAGYLPE NMMTLEEFEA IAEQGYDALD AHLITMDTAV
EHFAKVELPE SDTVNMMFGR TVPSPVSLEH EAVVRMYDQG TQRFLGLGQI KGAFIRPYRL
VNTSEFSL
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