Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0996 |
Symbol | |
ID | 5364978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 1104715 |
End bp | 1105908 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640803330 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001339862 |
Protein GI | 152995027 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTCTA AATTTAAATA TGCTTCAAGT ATGTTACTTG TTTTGTTGCT GGTTGGCTGT CAGGAGGAGG CCCCTAAGTC AGCGGTTGCA CCATCAGCCC CTCCTAAAGT GCAAGTGGGC GTTGTAATTA TTGAGCCTCA AAAAACAGAC TTGATGACTG AGCTGCCAGG TCGAACTACT TCTAGTTTGG TCGCTGAAAT TCGTCCTCAA GTTGGCGGAA TAGTTAAGAA GCGCTTTTTT GAGGAAGGTC AGGATGTAAA AACTGGCGAT TTACTTTATG AATTGGATGA TTCAACTTAT GTTTCTTCTT ATAAACAAGC GCAAGCTGAT TTAGAGTCTG CGAATGCTAG CCTTAAGTCT GCGCAACTGA AAAATGAACG TTACACTCAA TTGCGTAAAC AGAATAACGT TTCTCAGCAA GATCTTGATG ACGCGCATGT TGCTTATTTA GAAGCAATTG CTAAGCAAAA AGGTTCTGAA GCTGCGTTGG AAAACACCAA AATTAATCTA GGTTATACCA AGATTAAATC ACCGATAGAT GGTCGAATTG GTATTTCTCA AGTTACGGTG GGGGCATTGG TGACAGGTAG TCAAGCAACA GTGATGACAA CAGTTCGCTC TTTAGATCCT ATCTTTGTCG ATTTAGCACA AACCAGTTTA GATCAGCTTA AGCAACGAAA TTTCTTATCT CAAGATGATG TTGTAAAAGG TTCTAATAAA GTGTCTTTGA TACTTGAGGA CGGCACCAAA TACCAATATG AAGGTAACTT AAAAGCTCGA GAAGTTAGTG TTAATGAATC TACTGGCAGT GTGACTTTGC GCGCAGAATT TCCAAATCCA GATAATCTTT TGCTACCAGG TATGTTTGTA CGTGGTTTGA TTCATGAGTT AACTCATAAT GCGGCTCTTT TGGTGCCACA GCAGGGTGTT TCTCGCGACG TGAAAGGTAA TCCTATCGCT TTAGTTGTTA ATCAAAATAA TGTAATTGAA AGCCGCATTT TAACAGTTGA ACGTGCTATT GGTAATCAGT GGTTGGTGCT TTCAGGTGTT AAAGCTGGTG AAAAAGTGAT TGTTGAAGGT TCCTTGAAAG TGAAAGCGGG GGCTGAGGTG GTGCCAGTTG AGATGACAAG AGACCCTGAA AGCGGTGCTA TTGTTGCAAA GAATGCTAAT GCATCTTCGG CTCAAGGGAA TTAA
|
Protein sequence | MLSKFKYASS MLLVLLLVGC QEEAPKSAVA PSAPPKVQVG VVIIEPQKTD LMTELPGRTT SSLVAEIRPQ VGGIVKKRFF EEGQDVKTGD LLYELDDSTY VSSYKQAQAD LESANASLKS AQLKNERYTQ LRKQNNVSQQ DLDDAHVAYL EAIAKQKGSE AALENTKINL GYTKIKSPID GRIGISQVTV GALVTGSQAT VMTTVRSLDP IFVDLAQTSL DQLKQRNFLS QDDVVKGSNK VSLILEDGTK YQYEGNLKAR EVSVNESTGS VTLRAEFPNP DNLLLPGMFV RGLIHELTHN AALLVPQQGV SRDVKGNPIA LVVNQNNVIE SRILTVERAI GNQWLVLSGV KAGEKVIVEG SLKVKAGAEV VPVEMTRDPE SGAIVAKNAN ASSAQGN
|
| |