| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0992 |
|---|
| Symbol | |
|---|
| ID | 5366564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 1099051 |
|---|
| End bp | 1101390 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640803326 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_001339858 |
|---|
| Protein GI | 152995023 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00168374 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTTC TCTCGGTACT GTTTTTAGTC ATTGGTTTGG CTTTGCTATT GGGTGGTGGC
TGGCTTGTGT CACTTGATGG CAGTCTCTAC TATGTTGTTG CTGGCATTGC TTTTATCGCC
GTTGCTTTGT TGTTAAGAAA GCGTAATAAA ATAGCGAATC TAATTTACGC CTTGCTACTA
GTAGGAACCT TAATCTGGTC GATTATGGAA TCTGGTTTGA GTTGGTGGCC TTTAGCATCT
CGAATGGGGC TTTTCTTAAT CCTCGCCGTT CCTCTTCTCT TACTGGCTTT CTTTAAGCGA
CGCAGTGGTG GACGTGTGTT ATTGCCAGTT TGGTTAGCAA CAGCTTTAGT TACTATTTCT
CCTTTGTTCA TGACGTCACC AACGACGGTT GAAGGTACAA TGACGCGGTC AGTTACCATG
TCTGACGCGG ATACTGGTGA TGTTAATCAG GGGGAGTGGA ATGCATACGG ACGTAGTAAT
TTAGGTCAGC GATTCTCGCC ATTAGGTCAA ATTACACCTG ATAACGCTGA TCAGCTGCAA
CTTGCTTGGC AATATCAAAC AGGTGATAAA AAAGGCCCTA AAGATGTGGG TGAAACTACC
TACGAAGCGA CCCCTCTAAA ACTCGGAAAT GCTCTTTATG TTTGTACACC GCATAACTGG
ATTGTGGCAT TAGATGCGGA TACGGGTGAA GAGCAGTGGG TCTATGATGC GAAAGTGCCC
GCAGAAAGTC AGCGTCAGCA TCAGACTTGT CGTGGCGTAT CTTATTTACC GCCCACTAAT
TCTGTAAAAC TCCCACCTAT TCAAAAATCA TCTGTACCTG CTGAAAGTTT AGAAAGTATG
CAGTGTGACG CACAGTTGTT CTTACCTACA TCTGATGCAC GTTTAGTGGC TGTTGATCCT
ACAACGGGGG CGCGTTGCGC TAATTTTGCG GATAATGGCG AACTAGATTT GATGCACAAT
ATGCCGTTTA AGCAGTCGGG TTACTATTAT TCTACGTCGC CGCCATTAGT GGCTGGTGGT
GTGGTGATTG TCTCTGGGTC AGTGAATGAT AACTATGATG TGAATTCTCC ATCAGGTGTG
ATTCGCGCTT ACGATGTGAA AACGGGTGAG TTGAAATGGA ACTGGGATTC TGGTCACCCA
GACGATACAA CGCCTATAGG CCCAGATGAA ACTTATGCGA CAAGCTCGCC AAATAGCTGG
TCTGTTGCCA GTGCGGATGA AAAGCTTGGT TTGGCCTATT TCCCCATGGG GAATCGCACT
CCGGATCAGC TAGGTATGTA TCGTACTCCA GCGGAAGAAA AGTATGCGAC TTCGGTTGTG
GCTTTGAGCC TCGAAACTGG TCAGGTCGCT TGGGTTCAGC AGTTTGTTCA CCATGATCTA
TGGGATATGG ATACGCCAGC TCAACCTGCT TTGTTGGATT TAGATACACC AACGGGTAAG
CAGCCTGCTT TGGTGGTACC AACCAAACAA GGTGATGTGT ACGTGTTGAA TAGGAAAACG
GGTGAACCTA TTTTTCCTAT TACTGAGGAA CCAGCACCAC AGGGGACAAT TCCTGGTGAC
TATGCGGCGA AAACTCAACC TACTTCGGCT TTATCCTTTA AGCCTGCTAA GTTAATGGAA
GCAGATATGT GGGGCGCGAC ACCATTGGAC CAACTAATGT GTCGTATTCA ATTTAAGCAA
TTACGCTATG AAGGGCGCTA CACGCCACCA TCAGAGCAAG GTTCTATTGT TTACCCTGGG
AACTTTGGGG TATTTAATTG GGGAAGTATT GCGGTCGACC CAAAACGTCA ACAAATGTTT
GGCATGCCTT TGTATCTCGC TTTTACTTCT ACCTTGGTGC CAAAAGAAGG TGTTGATTTA
GGGGGAGCGA ATAAAGGTGA GCAAGGGTTA AACTCAAATG AAGGTGCAGA TTTTGCCGTT
GAATTGAAAC CTTTCTTATC GCCATTAGGT GTGCCTTGTC AGCAACCACC ATGGGGTTAT
GTGGCTGGTG TGGATCTTAA AACGGGCAAG ACCGCTTGGA AGCATAAAAA TGGCACCATC
GAAGACATGA CACCTCTTAA GTTGCCAATA GAAATGGGCA TGCCTGGCAT TGGTGGCCCA
GTGATTACAG ATGGCGGTGT TGTTTTCATG GCAGCGTCAG TTGATAACTA TTTGCGAGCT
TATGACATGT CTACTGGTGA AGAGTTGTGG AAAGGCCGTT TACCTGCGGG TGGTCAAGCT
ACACCAATGA CTTACTTAAA CAGCAAAGGT GAGCAAATGG TCGTTCTGGT AGCTGGTGGT
CATGGTTCCA TTGGTACAAC CATTGGTGAT TATGTGGTTG CTTATAAACT TAAAAAGTAG
|
|---|
| Protein sequence | MIVLSVLFLV IGLALLLGGG WLVSLDGSLY YVVAGIAFIA VALLLRKRNK IANLIYALLL
VGTLIWSIME SGLSWWPLAS RMGLFLILAV PLLLLAFFKR RSGGRVLLPV WLATALVTIS
PLFMTSPTTV EGTMTRSVTM SDADTGDVNQ GEWNAYGRSN LGQRFSPLGQ ITPDNADQLQ
LAWQYQTGDK KGPKDVGETT YEATPLKLGN ALYVCTPHNW IVALDADTGE EQWVYDAKVP
AESQRQHQTC RGVSYLPPTN SVKLPPIQKS SVPAESLESM QCDAQLFLPT SDARLVAVDP
TTGARCANFA DNGELDLMHN MPFKQSGYYY STSPPLVAGG VVIVSGSVND NYDVNSPSGV
IRAYDVKTGE LKWNWDSGHP DDTTPIGPDE TYATSSPNSW SVASADEKLG LAYFPMGNRT
PDQLGMYRTP AEEKYATSVV ALSLETGQVA WVQQFVHHDL WDMDTPAQPA LLDLDTPTGK
QPALVVPTKQ GDVYVLNRKT GEPIFPITEE PAPQGTIPGD YAAKTQPTSA LSFKPAKLME
ADMWGATPLD QLMCRIQFKQ LRYEGRYTPP SEQGSIVYPG NFGVFNWGSI AVDPKRQQMF
GMPLYLAFTS TLVPKEGVDL GGANKGEQGL NSNEGADFAV ELKPFLSPLG VPCQQPPWGY
VAGVDLKTGK TAWKHKNGTI EDMTPLKLPI EMGMPGIGGP VITDGGVVFM AASVDNYLRA
YDMSTGEELW KGRLPAGGQA TPMTYLNSKG EQMVVLVAGG HGSIGTTIGD YVVAYKLKK
|
|---|
| |