| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0925 |
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| Symbol | prpB |
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| ID | 5369118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Marinomonas sp. MWYL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009654 |
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| Strand | - |
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| Start bp | 1022937 |
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| End bp | 1023815 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640803258 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001339791 |
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| Protein GI | 152994956 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATAC TTTCAGCAGG CGCCCGTTTT AGACAAGCCG TCGTAACCCA ATCCCCATTG
CAGGTTGTTG GCGCTGTGAA CGCTTATTGC GCCATGATGG CGGAACAAAC GGGGCATCAC
GCCATTTACT TGTCTGGCGG CGGTGTTGCT AATGCCTCCT ATGGTTTACC CGATCTTGGC
ATGACAGATT TACACGATGT CTTGGAAGAT GTACGACGTA TCACTTCCGC TTCAAATTTA
CCATTACTAG TGGATATCGA TACCGGTTTT GGTGGCGCAT TTAATATCAC TCGAACCATT
CAGCAAATGG AAAAAGCAGG CGCGGCAGCG GTACATATTG AAGACCAAGT ACAACAAAAG
CGTTGCGGCC ATCGTCCAAA TAAAGCCATT GTTAGCCAAG ACGAAATGGT AGATCGCATC
AAAGCTTGTG TCGACGCTCG TGTCGATGAC AACTTTGTCA TCATGGCCCG TACCGATGCA
TTAGCTGTGG AAGGTATGGA ATCAGCCATA GAGCGAGCCA TCGCTTGCGT TGAAGCGGGT
GCCGATATGA TTTTTCCAGA AGCCATGATC ACTTTGGATC AATACAAAGA ATTTGTTGCT
GCCGTGAAGG TGCCGGTTTT AGCAAACATC ACCGAATTTG GTGCCACACC GCTGTTTAGC
AAAGAGGAAT TGGCCAGCGT TGGGGTAGAT TTGGTGCTGT ATCCGTTAAG CGCTTTTCGC
GCTATGAACA AAGCCGCATT GAACGTCTAT CAGCACTTAT TAGCTGATGG CCACCAGCGC
AGTGTGGTCG ACACAATGCA AACCCGTAAC GAGCTCTACG AGTTTCTCAA CTACCATGAA
TACGAAGACA AATTAGACGC GCTCTTCTCC AAGAAATAA
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| Protein sequence | MTILSAGARF RQAVVTQSPL QVVGAVNAYC AMMAEQTGHH AIYLSGGGVA NASYGLPDLG
MTDLHDVLED VRRITSASNL PLLVDIDTGF GGAFNITRTI QQMEKAGAAA VHIEDQVQQK
RCGHRPNKAI VSQDEMVDRI KACVDARVDD NFVIMARTDA LAVEGMESAI ERAIACVEAG
ADMIFPEAMI TLDQYKEFVA AVKVPVLANI TEFGATPLFS KEELASVGVD LVLYPLSAFR
AMNKAALNVY QHLLADGHQR SVVDTMQTRN ELYEFLNYHE YEDKLDALFS KK
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