Gene Mmwyl1_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0919 
Symbol 
ID5369231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp1012152 
End bp1013144 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content42% 
IMG OID640803252 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_001339785 
Protein GI152994950 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.110348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCAGCCTTGC TCTAACATCT TTAGCACTTG CTCTTTCTGC TACTACTGCA 
ATTGCAGCCT GCGATCCAGG TGAGCGCGTA GTAAAATTCA GCCACGTAAC TGGTGGCACC
ACTCACCCTA AAGTGGTTGC AGCGAATAGC TTCGCAGAAC GTGTAAATAA AGAAATGAAC
GGCAAGTTGT GTGTAGAAGT TTTCCCTAAC TCCACACTAT TTGGCGATTC TAAAGAACTT
GAAGCCCTGC TTTTAGGTGA TGTTCAACTA CTTGCTCCAT CACTTTCTAA ATTCGGCTCT
TACACTGACA AATACGGTGT ATTTGATCTA CCTTTCATCT TTAAAGACAT GGACCATGCC
ATCCGTTTCA CAAAAACACC TGAAGGCAAA AAGCTTTTAA CAGAAATGGA TGATTATGCA
GGTTTTGTTG GTTTAGGTTA CTGGATGTCT GGTATGAAAT ACTTCTCTGC CAACAAACCA
CTAATCGTGC CTAGCGATGC AAAAGGTTTG AAATTCCGTG TACAAACATC TGACGTAGCA
AAACAAATGA TTGCTGCTAT GGGTGCATCT CCTCAAGCAA TGGCGTTCTC TGAAGTATAT
GGCGCATTGC AAACAGGCGT TGTAGATGGA CAAGAAAACA CTTGGTCAAA CATCTACACG
AAAAAATTCT ACGAAGTACA AGACAGTACA ACTGAAACTA ACCACCAGCT ATTGGCTTAC
TTGTTCATGA CATCATCTGA ATTCTTGAAG AGCTTATCTC CAGAAGATCG CGCTCAGTTC
ATGCAAATTG CTGATGAAGT GACTCAAGAA GCTAACTTGA GCGTTAAAGC GGCAGAAGCG
GCTAACCGTG AAAACATCTT AAAAGCGGGT GGCAAAATCA ACGTATTGAC ACCAGAGCAA
CGCCAAGAAT GGGTAGATAC AATGAAGCCT GTTTGGCAGC AGTTTGAAAG CTACATTGGT
AAAGATTTGA TTAACGCAGC TGCTGGCGCG TAA
 
Protein sequence
MKKISLALTS LALALSATTA IAACDPGERV VKFSHVTGGT THPKVVAANS FAERVNKEMN 
GKLCVEVFPN STLFGDSKEL EALLLGDVQL LAPSLSKFGS YTDKYGVFDL PFIFKDMDHA
IRFTKTPEGK KLLTEMDDYA GFVGLGYWMS GMKYFSANKP LIVPSDAKGL KFRVQTSDVA
KQMIAAMGAS PQAMAFSEVY GALQTGVVDG QENTWSNIYT KKFYEVQDST TETNHQLLAY
LFMTSSEFLK SLSPEDRAQF MQIADEVTQE ANLSVKAAEA ANRENILKAG GKINVLTPEQ
RQEWVDTMKP VWQQFESYIG KDLINAAAGA