Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0919 |
Symbol | |
ID | 5369231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 1012152 |
End bp | 1013144 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640803252 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001339785 |
Protein GI | 152994950 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.110348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA TCAGCCTTGC TCTAACATCT TTAGCACTTG CTCTTTCTGC TACTACTGCA ATTGCAGCCT GCGATCCAGG TGAGCGCGTA GTAAAATTCA GCCACGTAAC TGGTGGCACC ACTCACCCTA AAGTGGTTGC AGCGAATAGC TTCGCAGAAC GTGTAAATAA AGAAATGAAC GGCAAGTTGT GTGTAGAAGT TTTCCCTAAC TCCACACTAT TTGGCGATTC TAAAGAACTT GAAGCCCTGC TTTTAGGTGA TGTTCAACTA CTTGCTCCAT CACTTTCTAA ATTCGGCTCT TACACTGACA AATACGGTGT ATTTGATCTA CCTTTCATCT TTAAAGACAT GGACCATGCC ATCCGTTTCA CAAAAACACC TGAAGGCAAA AAGCTTTTAA CAGAAATGGA TGATTATGCA GGTTTTGTTG GTTTAGGTTA CTGGATGTCT GGTATGAAAT ACTTCTCTGC CAACAAACCA CTAATCGTGC CTAGCGATGC AAAAGGTTTG AAATTCCGTG TACAAACATC TGACGTAGCA AAACAAATGA TTGCTGCTAT GGGTGCATCT CCTCAAGCAA TGGCGTTCTC TGAAGTATAT GGCGCATTGC AAACAGGCGT TGTAGATGGA CAAGAAAACA CTTGGTCAAA CATCTACACG AAAAAATTCT ACGAAGTACA AGACAGTACA ACTGAAACTA ACCACCAGCT ATTGGCTTAC TTGTTCATGA CATCATCTGA ATTCTTGAAG AGCTTATCTC CAGAAGATCG CGCTCAGTTC ATGCAAATTG CTGATGAAGT GACTCAAGAA GCTAACTTGA GCGTTAAAGC GGCAGAAGCG GCTAACCGTG AAAACATCTT AAAAGCGGGT GGCAAAATCA ACGTATTGAC ACCAGAGCAA CGCCAAGAAT GGGTAGATAC AATGAAGCCT GTTTGGCAGC AGTTTGAAAG CTACATTGGT AAAGATTTGA TTAACGCAGC TGCTGGCGCG TAA
|
Protein sequence | MKKISLALTS LALALSATTA IAACDPGERV VKFSHVTGGT THPKVVAANS FAERVNKEMN GKLCVEVFPN STLFGDSKEL EALLLGDVQL LAPSLSKFGS YTDKYGVFDL PFIFKDMDHA IRFTKTPEGK KLLTEMDDYA GFVGLGYWMS GMKYFSANKP LIVPSDAKGL KFRVQTSDVA KQMIAAMGAS PQAMAFSEVY GALQTGVVDG QENTWSNIYT KKFYEVQDST TETNHQLLAY LFMTSSEFLK SLSPEDRAQF MQIADEVTQE ANLSVKAAEA ANRENILKAG GKINVLTPEQ RQEWVDTMKP VWQQFESYIG KDLINAAAGA
|
| |