| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0375 |
|---|
| Symbol | |
|---|
| ID | 5367751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 433562 |
|---|
| End bp | 435286 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640802713 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001339248 |
|---|
| Protein GI | 152994413 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.812044 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.244045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTACA ATAAGAAAAA AATTGCACTC GCCGCCTTAC CCTTTGCTGT CATGATGCAT
TCAGCCACGT TATGGGCTGA CGCATATTCA GATGCAGCAG AAAAGTGGGT AGATACTGAA
TTCACCGTTT CTACTCTAAG CAAGCAACAA CAGCTTGATG AGTTGCACTG GTTCACCGAA
GCCGCGAAAA AATTCCGTGG TATGGAAATC AACGTGGCAT CTGAGACGTT AACGACTCAC
AAATACGAGT CTCAAGTGTT GGCAAAAGCC TTCACCGAAA TCACTGGCAT CAAAGTCAAC
CATGACCTGA TCCAAGAAGG CGATGTGGTC GAAAAACTGC AAACGCAAAT GCAGTCTGGC
CGTAATATTT ACGATGCTTA CGTCAATGAC TCTGATTTGA TCGGTACGCA TTTCCGTTAC
GGTAAAGTGG TGCCAATCTC TGACATGATG CAAGGCGATG GTAAAGATTT TACCTCCCCA
ACCTTAGATC TGGCTGACTT TATTGGTTTG GATTTCACCA CAGGGCCAGA TGGCAAACTT
TATCAACTGC CCACTCAGCA ATTTGCCAAC CTTTATTGGT TCCGTGCTGA CTGGTTTGCA
CGCCCCGATC TAAAAGCGAA ATTCAAATCC ATCTATGGCT ATGACCTTGG CGTTCCCGTT
AACTGGTCTG CTTATGAAGA CATCGCTGAG TTCTTCACAG ACAAGGTGAA AAATATCGAC
GGCGAGCGTG TTTATGGCCA CATGGATTAC GGTAAAAAAG ACCCTTCTCT AGGTTGGCGC
TTCACTGATG CTTGGTTCTC TATGGCCGGT GCGGGCGATA AAGGGATTCC GAATGGTTTG
CCTGTGGATG AATGGGGGAT TCGTATCAAA GATGCCTGTT CACCGGTTGG CTCAAGTGTG
TCCCGTGGTG GTGCTACCAA CGGACCCGCT GCGGTTTATG CCACTACCAA ATACGTGGAT
TGGTTACGTA AGTACGCACC ACCAGAAGCG CAAGGTATGA CCTTCTCTGA ATCTGGCCCA
GTACCAGCAC AAGGTGCTGT GGCTCAGCAA ATCTTCTGGT ACACCGCTTT CACCGCTGAC
ATGACGGCCA AAGGCCTACC TGTTGTCAAC GAAGACGGCA CGCCAAAATG GCGTATGGCT
CCCTCTCCAG TTGGGCCATA CTGGGAAGAA GGTATGAAGA AAGGTTATCA AGACGTTGGA
GCTTGGACTT TCATGAACTC CACACCAGAA GACCGTCGCT TAGCAGCTTG GTTGTACGCT
CAGTTCACCA CGGCCAAAAC CGTTTCTTTG AAGAAAACAT TAGTGGGATT AACACCGATT
CGTGAATCCG ATATCAACTC ACCTGAAATG GCCGCTGCAG CGCCTAAATT GGGCGGTTTG
GTTGAATTCT ACAAAGGGCC AGCGCGTAAA GAGTGGTCGC CAACTGGGAT CAACGTACCA
GATTATCCTA AGCTCGCTCA GCTTTGGTGG CAGTATATTT CTCAAGCAGC AAGCGGAGAA
GCAACACCAC AAGAAGCGCT TAATGGTCTA GCCGCAGCGC AGGATAAAGT CATGGAGCGT
TTAGAGCGCG CCAATGTACA ACCTATCTGT GGACCAAAAA TGAACAAGCC ACGTGATGAA
GCCTACTGGT TGGCTCAACC TGGCGCACCA AAACCGAAAT TGGCCAATGA GAAACCACAA
GGTGTCACGG TTTCTTACGA CGACCTACTT CGTTCTTGGG AATAA
|
|---|
| Protein sequence | MHYNKKKIAL AALPFAVMMH SATLWADAYS DAAEKWVDTE FTVSTLSKQQ QLDELHWFTE
AAKKFRGMEI NVASETLTTH KYESQVLAKA FTEITGIKVN HDLIQEGDVV EKLQTQMQSG
RNIYDAYVND SDLIGTHFRY GKVVPISDMM QGDGKDFTSP TLDLADFIGL DFTTGPDGKL
YQLPTQQFAN LYWFRADWFA RPDLKAKFKS IYGYDLGVPV NWSAYEDIAE FFTDKVKNID
GERVYGHMDY GKKDPSLGWR FTDAWFSMAG AGDKGIPNGL PVDEWGIRIK DACSPVGSSV
SRGGATNGPA AVYATTKYVD WLRKYAPPEA QGMTFSESGP VPAQGAVAQQ IFWYTAFTAD
MTAKGLPVVN EDGTPKWRMA PSPVGPYWEE GMKKGYQDVG AWTFMNSTPE DRRLAAWLYA
QFTTAKTVSL KKTLVGLTPI RESDINSPEM AAAAPKLGGL VEFYKGPARK EWSPTGINVP
DYPKLAQLWW QYISQAASGE ATPQEALNGL AAAQDKVMER LERANVQPIC GPKMNKPRDE
AYWLAQPGAP KPKLANEKPQ GVTVSYDDLL RSWE
|
|---|
| |