Gene Mmwyl1_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0174 
Symbol 
ID5365036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp202259 
End bp203614 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content41% 
IMG OID640802516 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_001339051 
Protein GI152994216 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCTTTG ATAAAAATTT ACAACGAGTC ATCGATGCGC TTAGTGATGG CGTCTATATA 
ACGGACGGGA ACGGTGTAAC AGTTACTATA AACAAGGCAT ATGAAAGAAT GACTGGGCTA
TCAAAGCATC GCTTAATAGG GATGCATATG TCGGAAGTGG TTAAGGCTGG TTATATTTCA
CGTTCTGTCT CGTTGGAGGT AATTAAAGAG CTAGATGCCG TAACTATTAT TCAGACCATT
GGGGATGATC ATAAGATATT TGTTTCTGGG ACTCCGATGT TTGATGAAAG AGGTCGTATT
GAGTATGTGG TTACGACGGC AAGAGATATA ACGGAACTTC TAAAGGCAAA ACATAAAGAA
GAGCAGTTAG ACCAATTGCT TAAATTAAAA GAACTCTACG GAAAATCGGC ATTAAATGGA
GATAATCAAG GAACCTTTAT TATTAGCCGT AATACGAAGG CCTGCTATGA CCTAGCAAAA
AAAGTAGCGA CATCTAATGC CAAAGTACTG ATTCAAGGTG AAACCGGCAC AGGCAAGACA
CTATTAGCGA ATACTATTCA TAAATTTAGT AAAGCGTGTG ATGGCCCATT TATTGAACTG
AATTGTTCGG CGATGCCAGA ATCGTTGCTG GAAGCGGAGC TTTTTGGATA TGTGCCTGGG
GCGTTTACAG GGGCTTCAGC AAAAGGACAT ATTGGATTAT TGGAAGCAGC CAACAATGGC
ACTTTATTTT TGGATGAAAT TGGTGATTTG CCGTTAAGTT TGCAGGTGAA GCTACTTAAG
GTTATTGCGG AAAATCGCTT TATTCCTGTC GGCGGGACAG ACTTTAAGAA CGTGAATTTC
CGTTTGATTT CTGCGACGCA CCATAACTTG AGGCAATTAG TAGAAACCAA ATTATTTAGA
GAAGATCTGC TGTATAGGTT GAATGTCGTT CCAATACATT TGCCCCCGTT ACGTGACAGG
AGAGACGAAA TTGTGCCCTT ACTTGAGCAC TATATTCAGT ATTTCAATAG GGTGTATGAA
CTAGATTGTC ATTGGCACCA AGAGGTTTTT GAACAGCTAG ATCGATATGA CTGGCCTGGT
AATATTCGTG AATTGATAAA CCTAACAGAG AGGTTGGTTG TTACCGCAGA TCAGCCACTA
ATTACTATTG AGCAATTACC TGCGGAATTT AAGCTAGAAT CGTCTTTTAT TGGCGAGAAA
CGTGCTTTGA AATCGCAAGT TGAAGCATTA GAGCAGCGAT TAATTGATGA GGCGATAAAA
GAGTGTGGGA CGACTAGGGC TGCGGCGAAA TTACTGGGTA TCGATCAATC TACGTTAGTT
AAAAAACAAA AGCGTTGGCG TAATGGAAAG CTATAG
 
Protein sequence
MVFDKNLQRV IDALSDGVYI TDGNGVTVTI NKAYERMTGL SKHRLIGMHM SEVVKAGYIS 
RSVSLEVIKE LDAVTIIQTI GDDHKIFVSG TPMFDERGRI EYVVTTARDI TELLKAKHKE
EQLDQLLKLK ELYGKSALNG DNQGTFIISR NTKACYDLAK KVATSNAKVL IQGETGTGKT
LLANTIHKFS KACDGPFIEL NCSAMPESLL EAELFGYVPG AFTGASAKGH IGLLEAANNG
TLFLDEIGDL PLSLQVKLLK VIAENRFIPV GGTDFKNVNF RLISATHHNL RQLVETKLFR
EDLLYRLNVV PIHLPPLRDR RDEIVPLLEH YIQYFNRVYE LDCHWHQEVF EQLDRYDWPG
NIRELINLTE RLVVTADQPL ITIEQLPAEF KLESSFIGEK RALKSQVEAL EQRLIDEAIK
ECGTTRAAAK LLGIDQSTLV KKQKRWRNGK L