Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0174 |
Symbol | |
ID | 5365036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | + |
Start bp | 202259 |
End bp | 203614 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640802516 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001339051 |
Protein GI | 152994216 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCTTTG ATAAAAATTT ACAACGAGTC ATCGATGCGC TTAGTGATGG CGTCTATATA ACGGACGGGA ACGGTGTAAC AGTTACTATA AACAAGGCAT ATGAAAGAAT GACTGGGCTA TCAAAGCATC GCTTAATAGG GATGCATATG TCGGAAGTGG TTAAGGCTGG TTATATTTCA CGTTCTGTCT CGTTGGAGGT AATTAAAGAG CTAGATGCCG TAACTATTAT TCAGACCATT GGGGATGATC ATAAGATATT TGTTTCTGGG ACTCCGATGT TTGATGAAAG AGGTCGTATT GAGTATGTGG TTACGACGGC AAGAGATATA ACGGAACTTC TAAAGGCAAA ACATAAAGAA GAGCAGTTAG ACCAATTGCT TAAATTAAAA GAACTCTACG GAAAATCGGC ATTAAATGGA GATAATCAAG GAACCTTTAT TATTAGCCGT AATACGAAGG CCTGCTATGA CCTAGCAAAA AAAGTAGCGA CATCTAATGC CAAAGTACTG ATTCAAGGTG AAACCGGCAC AGGCAAGACA CTATTAGCGA ATACTATTCA TAAATTTAGT AAAGCGTGTG ATGGCCCATT TATTGAACTG AATTGTTCGG CGATGCCAGA ATCGTTGCTG GAAGCGGAGC TTTTTGGATA TGTGCCTGGG GCGTTTACAG GGGCTTCAGC AAAAGGACAT ATTGGATTAT TGGAAGCAGC CAACAATGGC ACTTTATTTT TGGATGAAAT TGGTGATTTG CCGTTAAGTT TGCAGGTGAA GCTACTTAAG GTTATTGCGG AAAATCGCTT TATTCCTGTC GGCGGGACAG ACTTTAAGAA CGTGAATTTC CGTTTGATTT CTGCGACGCA CCATAACTTG AGGCAATTAG TAGAAACCAA ATTATTTAGA GAAGATCTGC TGTATAGGTT GAATGTCGTT CCAATACATT TGCCCCCGTT ACGTGACAGG AGAGACGAAA TTGTGCCCTT ACTTGAGCAC TATATTCAGT ATTTCAATAG GGTGTATGAA CTAGATTGTC ATTGGCACCA AGAGGTTTTT GAACAGCTAG ATCGATATGA CTGGCCTGGT AATATTCGTG AATTGATAAA CCTAACAGAG AGGTTGGTTG TTACCGCAGA TCAGCCACTA ATTACTATTG AGCAATTACC TGCGGAATTT AAGCTAGAAT CGTCTTTTAT TGGCGAGAAA CGTGCTTTGA AATCGCAAGT TGAAGCATTA GAGCAGCGAT TAATTGATGA GGCGATAAAA GAGTGTGGGA CGACTAGGGC TGCGGCGAAA TTACTGGGTA TCGATCAATC TACGTTAGTT AAAAAACAAA AGCGTTGGCG TAATGGAAAG CTATAG
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Protein sequence | MVFDKNLQRV IDALSDGVYI TDGNGVTVTI NKAYERMTGL SKHRLIGMHM SEVVKAGYIS RSVSLEVIKE LDAVTIIQTI GDDHKIFVSG TPMFDERGRI EYVVTTARDI TELLKAKHKE EQLDQLLKLK ELYGKSALNG DNQGTFIISR NTKACYDLAK KVATSNAKVL IQGETGTGKT LLANTIHKFS KACDGPFIEL NCSAMPESLL EAELFGYVPG AFTGASAKGH IGLLEAANNG TLFLDEIGDL PLSLQVKLLK VIAENRFIPV GGTDFKNVNF RLISATHHNL RQLVETKLFR EDLLYRLNVV PIHLPPLRDR RDEIVPLLEH YIQYFNRVYE LDCHWHQEVF EQLDRYDWPG NIRELINLTE RLVVTADQPL ITIEQLPAEF KLESSFIGEK RALKSQVEAL EQRLIDEAIK ECGTTRAAAK LLGIDQSTLV KKQKRWRNGK L
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