Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmwyl1_0107 |
Symbol | |
ID | 5369199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Marinomonas sp. MWYL1 |
Kingdom | Bacteria |
Replicon accession | NC_009654 |
Strand | - |
Start bp | 117978 |
End bp | 120266 |
Gene Length | 2289 bp |
Protein Length | 762 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640802449 |
Product | penicillin-binding protein 1C |
Protein accession | YP_001338984 |
Protein GI | 152994149 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCT TTAAGGCTCG ATTCCGGTTA TGGGCTTATT TGCCTATCGC CGGAATACTG TTGTTTTTGT CTTTCTTGAT ATTCGACTGG GTTGCACCGG TCGATTTAGA ATCCCGTTCA CTTAGTCAAA CCGTTCTTGC TGAGGATGGT TCTATTTTAC GTAATTTTGC GGATGAAAAC GGCGTGTGGC GATTTCCTGT TACCTTAGGC GATGTTTCCC CAAACTACCT TGAAGCGCTG ATCACTTACG AAGATCAATA TTTTTACCAT CATCCCGGCG TTAATTTTTT TGCTCTCATT CGTGCCACTT GGCAATGGCT CAGCACAGGC GAGATAGTCT CTGGCGGCTC AACGTTAACC ATGCAAGTTG CTCGCATTCG CTATCCAGAG GCCAGAACCG TATGGGGAAA ACTCAAAGAG ATCGTCCGTG CTCTACAATT AGAATGGCAC TTTAGTAAAA CCGACATACT TACTTATTAC CTCAATCACG CACCTTTTGG TGGCACCTAT GAAGGCATTC AAGCCGCTTC TTTGGGCTAC TTTGGTCATA CGGTGAAACA ACTGACTGAC GCCCAAGCAG CTCTCTTGGC AGTTTTGCCG CAAGCGCCCA GCTATTACCG ACCAGACCGA CATAACGAAC GCGCCCAACA AGCGCGAGAT AAATTAATGC GCCGCTTAGT AACACTGAAA GAATGGTCCA CCGAGCGCTT AAACGATGCG TTAATCGAAG ACATTCCCGC TGTAACCAAA CAAGACTATC AATCTGCACC CTTGCTCGCT CGCAGGTTAG TGACACACAA CAAATCGCCC CAGATAGAAA CTTTTATACA CTCTCAATGG CAAGGTCAGA TCAGCAATTT GCTCAGAAAT TATGTCCATG GTATTGGTCA GAAAGTTTCG GCAGCCGCAT TGGTTGTCGA AAACGAAACA GGCAAGGTGA AAGTCTACGC GGGATCAGCC GATTTCAACG ACAGCAGCCG TTTCGCTTAT GTGGATATGG TGCAAGCCAC ACGCTCGCCA GGCTCAACAC TTAAACCCTT TATTTACGGT ATGGCACTGG ATGAAGGCTT AATTCATAGC GAAAGTTTAT TAATGGATGT GCCACTCAAG TTCGGGGACT ATCAACCCGA CAACTTCAAT GGTGGCATCA GTGGACCAGT ATCCGTCACC CATGCCTTGC AAAAAAGCCT GAATATTCCA GCGGTGCAAG TATTGGAACA GCTCAAGCCC ATTTATTTTT TCTTAAAAAT GAAAAAAGCA GGCATCGAGT TGAAACTCCC GACCGGAGCA AAGCCTAATT TAGCAGTGGC TCTCGGTGGA GTTGGCTCTG ATTTAGAAGA TCTTGTCTAT GCCTACACCA GCCTTGGAAA CAAAGGCCAA GCACAGCATC TGCGTTTTAG TACCGAAGAT AAACAATCAC AACAACCGCT GTTGAGCAAT GGCGCCGCTT GGATTATTCG CAAAATATTA TTAGATAATC CAGACTCTGT TTCTGGCTTA GCGGTTAAGA CCGGCACAAG CTATGGATTC CGCGATGCGT GGGCGATTGG GGTGAGCCAA CATTATACAT TAGGCGTTTG GATTGGCAGA CCCGATGGTG TTCCTATGCC CGGCCATTAC GGTCAAGTTA CCGCAGTGCC ATTATTAAAC AATATTTATC AACGGCTCAA TGATCGACGC CCAGATCCTC TGATGCCCGA CAGCGTGTCT AAAGTAGACA TATGCTGGCC ACAAGGTGAC ATAGTTAAAA CGGTTTGTGA GGAGAGCCAC AGTGCTTATA TTCTTGACGG CACCATTCCT AAGACTTGGT ATAACACTGC GTCGCTACAG CAGCCATTCA ACCAATCTGA ATTTCAATTC TGGCAAGCAG ATGATTCCAA GTTACGAGTC AATATAAGCT GTCAGGTTAA CGCCAAACGT CATAAGGTAA CCGTTTGGCC TGCGCCCTTG GATAATTGGC TAAGCTTGGA ACAACGCCGT TCATCTCGAA TACCGAGCTG GGATCCTAGA TGTGAAACAA CAGGCAATCT AGTCAGTCAA TCTGCCGTGC GTATCTACGG GCTTGCAAAT CAGGATGCGT TCCAGCTACC GAAGCAACAA AACCAAGAAA TCACCCTTTC TGCGGAAGGA GGAGAAGCGC CTTTTTACTG GTTTTTAAAC GGCGTGTTGC TACCCGACCA GCAAAGAAAA ACCACATTAA AAGACCTAAA ATCCGGCAAC TATCAACTCA CGTTAATAGA CCAAGCGGGC TCAAGAGACC AAGTCGAATT TTCGGTTCTT CTCTATTAG
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Protein sequence | MARFKARFRL WAYLPIAGIL LFLSFLIFDW VAPVDLESRS LSQTVLAEDG SILRNFADEN GVWRFPVTLG DVSPNYLEAL ITYEDQYFYH HPGVNFFALI RATWQWLSTG EIVSGGSTLT MQVARIRYPE ARTVWGKLKE IVRALQLEWH FSKTDILTYY LNHAPFGGTY EGIQAASLGY FGHTVKQLTD AQAALLAVLP QAPSYYRPDR HNERAQQARD KLMRRLVTLK EWSTERLNDA LIEDIPAVTK QDYQSAPLLA RRLVTHNKSP QIETFIHSQW QGQISNLLRN YVHGIGQKVS AAALVVENET GKVKVYAGSA DFNDSSRFAY VDMVQATRSP GSTLKPFIYG MALDEGLIHS ESLLMDVPLK FGDYQPDNFN GGISGPVSVT HALQKSLNIP AVQVLEQLKP IYFFLKMKKA GIELKLPTGA KPNLAVALGG VGSDLEDLVY AYTSLGNKGQ AQHLRFSTED KQSQQPLLSN GAAWIIRKIL LDNPDSVSGL AVKTGTSYGF RDAWAIGVSQ HYTLGVWIGR PDGVPMPGHY GQVTAVPLLN NIYQRLNDRR PDPLMPDSVS KVDICWPQGD IVKTVCEESH SAYILDGTIP KTWYNTASLQ QPFNQSEFQF WQADDSKLRV NISCQVNAKR HKVTVWPAPL DNWLSLEQRR SSRIPSWDPR CETTGNLVSQ SAVRIYGLAN QDAFQLPKQQ NQEITLSAEG GEAPFYWFLN GVLLPDQQRK TTLKDLKSGN YQLTLIDQAG SRDQVEFSVL LY
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