Gene Mmwyl1_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0034 
Symbol 
ID5366518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp38181 
End bp39206 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content46% 
IMG OID640802377 
ProductTRAP dicarboxylate transporter- DctP subunit 
Protein accessionYP_001338912 
Protein GI152994077 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGG CGATACTAAA AGTAAAAAAA CGATTGGTTG TAAGTTCTCT AGCGGTGGCC 
CTTGGATTAG GCGCTGTCGC TTCTTCTGCT AACGCTGCAG ACTATAACTG GCGCTTCGCT
AACCTATACA GCCGTGGTTC TGCCTTCGGT GCTGTGTATG AAGATTTAGC AAAAAACATT
GAGACTATGT CCGACGGCCG CATCAAGGTA CAAGTTCTTT ATGACGGTGA AGGTGTTGGT
TCTTCTGGTA TTTTTGGTGC AGTAAAAACA GGCCTAATTA CTATGGGCGC GACGTTCCAA
TCTTTGAACG CAGGCGAACT TCCTGCTGGT TTGGTTGAAA TTGGCCTACC TGGCGGCACA
AGCGATGTAG GTGAACTAAC TACCTTGTTC CAAGAAAAAG GCTGGGCGCC AATTCTTAAA
GAAGCCTATG GTGCGCAAGG TCTAGTTTGG CTTGACCCAT ACATTCAGCC AGCGGTTTAC
GTTATTACGA AAAAACCAAT CAATTCTATT GAAGACTTCC AAGGCTTGAA AATCCGTGCG
CCAGGCGCAT ACGGTAAGTT CCTACGTAAC CTAGGCGCTT CTCCTGTTTC TCTTGCTTGG
TCTGAGATCT ACACAAGTCT TTCAACTGGC GTAATCGATG GTTCGATCGG TTCTAACATG
ATCGACCACC GCGATGGTAA CCACGTTGAA GTAGCGAAAT ACATGTACCC ACTTCCTCTA
GCTGGTGCTC AAGTGTTACC TATTATCGTG AACCAAAGTG CTTGGAACAA ACTTCCAGCG
GATCTAAAAG CCATTGTGAA AGCGGCGACT ACCGTTCACG CTCAAGAGCA AATGACAAAG
TCTAGACTTT GGGAATCTGA AGCCATTGCT GACATGGAAG CGAAAGGCCT TCAGTGGAGC
CCTGAGCCAA GTGCAGCAGA TAAAGCCGCA TGGAAAGCAG CAGGCGCTAA ACTTTGGGAT
GAGTACGCAG CTGCAGATAA ATACAGCAAA GAGTTAATTG ATGTGCTTCG CAAAGAACAG
AAATAA
 
Protein sequence
MIKAILKVKK RLVVSSLAVA LGLGAVASSA NAADYNWRFA NLYSRGSAFG AVYEDLAKNI 
ETMSDGRIKV QVLYDGEGVG SSGIFGAVKT GLITMGATFQ SLNAGELPAG LVEIGLPGGT
SDVGELTTLF QEKGWAPILK EAYGAQGLVW LDPYIQPAVY VITKKPINSI EDFQGLKIRA
PGAYGKFLRN LGASPVSLAW SEIYTSLSTG VIDGSIGSNM IDHRDGNHVE VAKYMYPLPL
AGAQVLPIIV NQSAWNKLPA DLKAIVKAAT TVHAQEQMTK SRLWESEAIA DMEAKGLQWS
PEPSAADKAA WKAAGAKLWD EYAAADKYSK ELIDVLRKEQ K