Gene Mmwyl1_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmwyl1_0023 
Symbol 
ID5366903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMarinomonas sp. MWYL1 
KingdomBacteria 
Replicon accessionNC_009654 
Strand
Start bp26635 
End bp27468 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content44% 
IMG OID640802366 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001338901 
Protein GI152994066 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.275556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.424969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACA AGGCACTATT CAAAAAGGCC GCTTTTTACT CTGTCGTAGT TGTCATCGTA 
CTTATCTCGG TTTTTCCGTT TTATTACGCG ATTTTAACAA GCCTTAAAAC GGGTTCTGAT
TTATTCAAAG TGAACTATTT TCCTTCCTCG TTTAATTTCA GCAACTACAT AGATGTATTG
AATAATGGTC AGTTTATTAG AAATACTCTG AACTCCGTCT TCATTGCGAG CACCACGGTT
ATATTCGCTT TGTTTCTTGC TGTTACAGCG TCATACGCAT TAGCTCGTGT ACGTTTTAAA
GGGCGAGGAC TGCTGCTTAT GGCAATTTTA GCTATCTCGA TGTTCCCACA AATTGCGGTT
CTGGCCGGTT TATTTGAGCT AATTCGCTTT ATTGGAATTT ACAACACGCC TTGGGCCATG
ATTCTGTCCT ACACCATTTT TACGCTGCCA TTTACCGTTT GGGTGCTAAC CACCTTTATG
CGAGATTTAC CCGTAGAAAT AGAAGAGGCG GCCATCGTGG ATGGGGCCAC GCCTTGGGTC
ATTATCACGC AAATTTTTAT GCCCTTATTG TGGCCGGCCT TGGTCACCAC AGGGTTGCTC
GCTTTTATTG GTGCTTGGAA CGAGTTTTTA TTCGCGTTGA CTTTCACAGC ATCAGAGACC
ATGCGTACTG TGCCTGTCGC CATTGCCATG CTGTCAGGCT CATCTCAATA CGAAACACCT
TGGGGGCTCA TTATGGCAGC CTCTGTTTTG GTCACCATTC CGTTGGTGAT CTTGGTGCTT
ATTTTCCAGC GAAAAATTGT ATCCGGCCTA ACCGCTGGTG GTGTGAAAGG CTAA
 
Protein sequence
MTNKALFKKA AFYSVVVVIV LISVFPFYYA ILTSLKTGSD LFKVNYFPSS FNFSNYIDVL 
NNGQFIRNTL NSVFIASTTV IFALFLAVTA SYALARVRFK GRGLLLMAIL AISMFPQIAV
LAGLFELIRF IGIYNTPWAM ILSYTIFTLP FTVWVLTTFM RDLPVEIEEA AIVDGATPWV
IITQIFMPLL WPALVTTGLL AFIGAWNEFL FALTFTASET MRTVPVAIAM LSGSSQYETP
WGLIMAASVL VTIPLVILVL IFQRKIVSGL TAGGVKG