| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0005 |
|---|
| Symbol | |
|---|
| ID | 5365010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | - |
|---|
| Start bp | 6658 |
|---|
| End bp | 7503 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640802348 |
|---|
| Product | NmrA family protein |
|---|
| Protein accession | YP_001338883 |
|---|
| Protein GI | 152994048 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.761277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000000000896871 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAG TTACTGGCGC ATCTGGCCAA CTTGGTCGTC TTGTCATTGC TTCATTGCTA
GAAAAAACAG CAGCAAGCAA CATTATTGCC GCGGTTCGTA ACCCAGAAAA AGTGGCAGAT
TTGGCAGAAA AGGGCGTTCA AGTTCGTCAA GCTGATTACA CAGACCAAGA CTCTCTTGTT
GCTGCAATGC AAGGTGTTGA AAAAGTATTA TTAATCTCGT CAAGCGAAGT GGGCCAACGT
ACTGCTCAGC ACAGCAATGT CATCCATGCG GCGAAACAAG CGGGCGTTTC CTTGCTGGCT
TACACCAGTA TTTTAAACGC GGACAAATCA CCTCTTATTT TGGCAAAAGA ACACGTAGAA
ACAGAAAATC TGTTAGCGGA ATCTGGCGTA CCTTATGTAT TACTGCGCAA TGGCTGGTAC
TCAGAAAACT ACACAATGGG CGTAGCAGGC GCACTAGAGC ATGGTGTTGT TGGTTGTGCC
GAAGATGGAA AACTGTCTAC TGCAGCACGT GCAGACTATG CTGCTGCGGC CGCGGCCGTA
CTGGTTAAAG ATGGACAAGC GGGCAAAGTC TATGAACTGG CTGGCGATAA TGCTTTCACG
TTAAGCGTAT ACGCTGCTGC GATCAGCAAG GTATCAGGCA AAACCGTCGC TTATCAAAAC
GTTCCTGAAG CGGAATTCAC CAAAATCCTG GTTGGCGCAG GCTTGCCAGA AGGCTTCGCA
GCCATCCTTG CGGACTCAGA AGTTGGCGCA TCCCAAGGAG CCTTGTTCAG CGACAGCAAA
GATTTATCAA CGCTAATTGG CCGCCCAACC ACGCAAATTG AAGACAGCAT TAAAGCAGCG
TTGTAG
|
|---|
| Protein sequence | MILVTGASGQ LGRLVIASLL EKTAASNIIA AVRNPEKVAD LAEKGVQVRQ ADYTDQDSLV
AAMQGVEKVL LISSSEVGQR TAQHSNVIHA AKQAGVSLLA YTSILNADKS PLILAKEHVE
TENLLAESGV PYVLLRNGWY SENYTMGVAG ALEHGVVGCA EDGKLSTAAR ADYAAAAAAV
LVKDGQAGKV YELAGDNAFT LSVYAAAISK VSGKTVAYQN VPEAEFTKIL VGAGLPEGFA
AILADSEVGA SQGALFSDSK DLSTLIGRPT TQIEDSIKAA L
|
|---|
| |