Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1806 |
Symbol | |
ID | 5329325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1769552 |
End bp | 1770313 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640794356 |
Product | extracellular solute-binding protein |
Protein accession | YP_001331010 |
Protein GI | 150403716 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0263139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000066734 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGTTTAATC CCAAAATTTT AATAATCTCA ACGATATTTT TAATAATCTT TTCAGGCTGT ATTGCCGAAA ATACGAATAA AACTACAATC CAAGAGGGTA TTTTAACTAT TGGAATTTCT CCAGATTTAC CTCCGATATC ATATCTTGAT AACAAAAATC CGGCAGGATT TGAAATTGAT TTAATAACCG AAATTGCAAA AAGAATGAGT TTAGAACCTG AATTTAAAAT ATATGAATTT TCATCACTTC TTGATGCTGT CGAAAACAGT GAAATTGATT GTGCGGTAGC ACTTATTGCA ATAACCCCTG AACGAGAGAA TAAAGTGGAC TTTTCACGAT GTTATTTTAA AACGTACACA ACGATTCTTG TAAAAGAAAA CGATTTCTGC AACGGATTAA AATGTCTTGA GAATAAAAAA GTCGGGGTTT TAAAGGGCAG CGTTCAAGAA TCACTGATGG AAGGATTTTT GGATGATATG GAATTTGAAC TAGTTCATTA TGAGAATCAG GAATATATGC ACAAGGATTT ACTTTCTGGA AGCATCGATT CGGAAGTTTG TGAATTTTTA ACTGCTAAAA ATCTTATAAA TGATAGAAAC TACTCTTTAA AAATTGTTGG AGATCAGATG GATATCAATT ATGATGCCAT AGCAGTAAAT TCTGAAAATG ATGATCTGAA AAGAGCAATA AATACAGCAA TTCTTGAAAT GGAGAATGAT GGAACAGTAG TTCAATTAAA AGAAAAATGG AATATTGATT AA
|
Protein sequence | MFNPKILIIS TIFLIIFSGC IAENTNKTTI QEGILTIGIS PDLPPISYLD NKNPAGFEID LITEIAKRMS LEPEFKIYEF SSLLDAVENS EIDCAVALIA ITPERENKVD FSRCYFKTYT TILVKENDFC NGLKCLENKK VGVLKGSVQE SLMEGFLDDM EFELVHYENQ EYMHKDLLSG SIDSEVCEFL TAKNLINDRN YSLKIVGDQM DINYDAIAVN SENDDLKRAI NTAILEMEND GTVVQLKEKW NID
|
| |