Gene MmarC7_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1806 
Symbol 
ID5329325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1769552 
End bp1770313 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content31% 
IMG OID640794356 
Productextracellular solute-binding protein 
Protein accessionYP_001331010 
Protein GI150403716 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0263139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000066734 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTTAATC CCAAAATTTT AATAATCTCA ACGATATTTT TAATAATCTT TTCAGGCTGT 
ATTGCCGAAA ATACGAATAA AACTACAATC CAAGAGGGTA TTTTAACTAT TGGAATTTCT
CCAGATTTAC CTCCGATATC ATATCTTGAT AACAAAAATC CGGCAGGATT TGAAATTGAT
TTAATAACCG AAATTGCAAA AAGAATGAGT TTAGAACCTG AATTTAAAAT ATATGAATTT
TCATCACTTC TTGATGCTGT CGAAAACAGT GAAATTGATT GTGCGGTAGC ACTTATTGCA
ATAACCCCTG AACGAGAGAA TAAAGTGGAC TTTTCACGAT GTTATTTTAA AACGTACACA
ACGATTCTTG TAAAAGAAAA CGATTTCTGC AACGGATTAA AATGTCTTGA GAATAAAAAA
GTCGGGGTTT TAAAGGGCAG CGTTCAAGAA TCACTGATGG AAGGATTTTT GGATGATATG
GAATTTGAAC TAGTTCATTA TGAGAATCAG GAATATATGC ACAAGGATTT ACTTTCTGGA
AGCATCGATT CGGAAGTTTG TGAATTTTTA ACTGCTAAAA ATCTTATAAA TGATAGAAAC
TACTCTTTAA AAATTGTTGG AGATCAGATG GATATCAATT ATGATGCCAT AGCAGTAAAT
TCTGAAAATG ATGATCTGAA AAGAGCAATA AATACAGCAA TTCTTGAAAT GGAGAATGAT
GGAACAGTAG TTCAATTAAA AGAAAAATGG AATATTGATT AA
 
Protein sequence
MFNPKILIIS TIFLIIFSGC IAENTNKTTI QEGILTIGIS PDLPPISYLD NKNPAGFEID 
LITEIAKRMS LEPEFKIYEF SSLLDAVENS EIDCAVALIA ITPERENKVD FSRCYFKTYT
TILVKENDFC NGLKCLENKK VGVLKGSVQE SLMEGFLDDM EFELVHYENQ EYMHKDLLSG
SIDSEVCEFL TAKNLINDRN YSLKIVGDQM DINYDAIAVN SENDDLKRAI NTAILEMEND
GTVVQLKEKW NID