Gene MmarC7_1790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_1790 
Symbol 
ID5328879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp1752538 
End bp1753035 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content28% 
IMG OID640794341 
ProductMarR family transcriptional regulator 
Protein accessionYP_001330995 
Protein GI150403701 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.167735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000130168 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATTT TGAAGAACAT GGATAAAATA TGGGAATTTA TGTATATTGC TTCAAGAAAC 
TATCTTTATA CAAAAATACC TGAAGAAGAA GTGTCAAATT TTACACTGGC CGATAGAGAA
TATTTAGAAA CAATAAACCG GATGAAAAAT CCAAAAATTT CAGAACTTGC AGAAAAAATG
GGTTATACAA ATGCTGCAAT TACAAAAATG ACCCAAAAAT TAGAAAAAAA AGACTATGTT
AAACGAATAA AATCTGAAGA AGATAAAAGG GAAGTAATTA TTGAATTAAC TGAAAAAGGA
AATTTTATGT TCCGCTGGAA AGAAGAAATG AATTTAGCTA CGATAGATGA ATTTTCAAAA
GCATTAACTC CTGAAGAACT TGAAACTCTT GATAAATTAT ACGAAAAAAT TGGAACACAC
CTGAATAAAA AACTTTCTTT AATTTATTCC CAAAATCCAT GTGGAAAAAA AATTGAGGGC
AGAATCATTT CATTATAA
 
Protein sequence
MNILKNMDKI WEFMYIASRN YLYTKIPEEE VSNFTLADRE YLETINRMKN PKISELAEKM 
GYTNAAITKM TQKLEKKDYV KRIKSEEDKR EVIIELTEKG NFMFRWKEEM NLATIDEFSK
ALTPEELETL DKLYEKIGTH LNKKLSLIYS QNPCGKKIEG RIISL