Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1773 |
Symbol | |
ID | 5329117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | + |
Start bp | 1728216 |
End bp | 1730372 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640794326 |
Product | hypothetical protein |
Protein accession | YP_001330980 |
Protein GI | 150403686 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4870] Cysteine protease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00222697 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGAATTTTT TTAAAAAAGT TTCAATAATT TTACTATTGT TTGTATTGAT TTCAGCAAAT TTTTCAGAAT CTGTAGATGA TGGAAAATAT ATTTTCCACA ATTTCACTGA AGAAGACGCA GAAGAAATGG GTGTAATTGA AAATATAACG AAAAACACGA CTGATTTTGA AACTTCAAAT ATTCAGACAT TTTCTTCACG TTCAACAGAT AATGAAGAAC CTTACGTAAT GGGATGTTTC CTTCCGACCA AGGAAGAATT ACTTTCAATG GCAGACCAAA TTACGGTTGT CGAGGGCCTC TCTGAAAATG CAAATCTATC AAATAATTCA TATCTCGATC TTTCAAAAGA CCCCTGCTTT CCAACGGTTG GTGATCAAGG CAAAATTGGT TCATGCGCTT CATGGGCGAT AGTATATTAT GCAAATTCGT ATTTACAGGC AAAAATTTAT GACTGGGATT TAAAAGAAAA TGATAGTTTA AAATGTTTTA ACCCTATGTG GGCATATAAT AAATTAAATA ATGGAGAAAA TGGCGGTTCC CAACTCAGTA GTAATCTAAA ATTAATTTCA AGACTCGGCA GTGCAACCTA TGAAACAATG CCTCTAACTG ATAACTACAC TGTTTGGGGA AATGAGGAAG CATGGATCGA AGCACCACAG TACCGGATAA CAGGTTTTGA AGTTTCTTCT ACTAATAATA CTGAGGTCAT GAAATCATGG TTGAATGAAG GATCTATAAT CATCATTGCA ATGCATGGTC AGGACGTTTT TACATTTGAT AATGATTCAA TACTTTCAGA CCTTGATCAG TCACATGAAA AAGCAAATCA TGCACAGGCG GTTGTTGGAT ACGATGATAG TATATCTGAA GATAATGAAA CAGGTGCTTT TAAGGTCATG AATTCTTGGG GCGCTAATTG GAGTCCAAAT GGTGATGGAA GCTATTATAT AACTTACAAG GCAATGGCAA ATATGAATTA TACCGAATGC TGGAGAATAT CTGGTGCAAG ATACAATACT TCAGATTCTA AGCCCGAACT TATTGGGGTT GTAAAGTTAG ATCCTGAAAA TAAAAGTACA AAAGATCAGA ATATGGTTTT TGGAATTGGA AATGAATCGA ATATCTTAGG ATATGTTGAT ATATATGGGG GCTGTAATGA AACAGGTGGA AACGGTTCAA TGCCTGATTT TATCGCAGTA GATTTAACTG ATTGGAAAAC AGAGTTTGAA GACTCATTGG AAAATACTGG AAAAGGATAT TACTTTGCTA ACTTTTCAAA TGGGACTGAA AGTTCAATAA TTTCTGAATT CGGGATAATT CAATACAGTT CATACCCCAA TATCGAAGAA ATTAATTCTG TCAATTCATT TGGATGCAAT AATTCGACAG TATTTAAATT ATTCAGTAAA TTAGCCCCTT CAGTACTTAA TTCATATATA AACGTAGGAA AAAATGATAT TGATATTTTA ATAAATGCAG AGGATGATGA TTTATGGGGT ATAAATGCAT GTTTTGATGG TTCAAATGTA TCTTATTCGC TAAATGGTAC CAGCAATACT TTTGAGGGAT TATTTAATAA ATCAACATTT TCTTACGGGG AACATTATGT TATTTTTGAG TTATTTGATG GCTGCGGAAA TTTATTTGCT GAAAATGTAA GTTTTGAAAT TTCAGCCCCA GTTACTTCTT CAAGAAGTAC TGGAAACCAT TATAGTTCTG ATCTTTCTGA TGGAATAGAT TTTGGAACCA TTAAAAAAGC AGTTTCAAAT TCAAATATTG TATACGGAAA CGAAATCGAT GAAGGATATG CTTTGAATTT GAGAGAAACT GTTCAAAATG CAAATAATTA CGAACTTTCA GGAGACACAA TAATTGTTGG TGGACCAGAA GCAAATGGAT TTGCTAACAA ATATGATTCA GAGTTTGAAA TATCAATTAC AAATGATTAC CCTGGAGAAA ATAAAGGGGT TATTCAGGTT AAGGATATTG AAGTACGCGA TGGAAACTTC ATCAAAACTT ACCCGGTAAT ATACATTGCA GGTTCTGACA GGTACGGAAC AGAAGCAGCT CTCGAATACT TTAAAACTTT GGAAGAACTT CCAGATGGAG CTTTAATTTT AGAATGGACG GAAGATGGGC CGGTTCTAGT TTATTAA
|
Protein sequence | MNFFKKVSII LLLFVLISAN FSESVDDGKY IFHNFTEEDA EEMGVIENIT KNTTDFETSN IQTFSSRSTD NEEPYVMGCF LPTKEELLSM ADQITVVEGL SENANLSNNS YLDLSKDPCF PTVGDQGKIG SCASWAIVYY ANSYLQAKIY DWDLKENDSL KCFNPMWAYN KLNNGENGGS QLSSNLKLIS RLGSATYETM PLTDNYTVWG NEEAWIEAPQ YRITGFEVSS TNNTEVMKSW LNEGSIIIIA MHGQDVFTFD NDSILSDLDQ SHEKANHAQA VVGYDDSISE DNETGAFKVM NSWGANWSPN GDGSYYITYK AMANMNYTEC WRISGARYNT SDSKPELIGV VKLDPENKST KDQNMVFGIG NESNILGYVD IYGGCNETGG NGSMPDFIAV DLTDWKTEFE DSLENTGKGY YFANFSNGTE SSIISEFGII QYSSYPNIEE INSVNSFGCN NSTVFKLFSK LAPSVLNSYI NVGKNDIDIL INAEDDDLWG INACFDGSNV SYSLNGTSNT FEGLFNKSTF SYGEHYVIFE LFDGCGNLFA ENVSFEISAP VTSSRSTGNH YSSDLSDGID FGTIKKAVSN SNIVYGNEID EGYALNLRET VQNANNYELS GDTIIVGGPE ANGFANKYDS EFEISITNDY PGENKGVIQV KDIEVRDGNF IKTYPVIYIA GSDRYGTEAA LEYFKTLEEL PDGALILEWT EDGPVLVY
|
| |