Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC7_1754 |
Symbol | |
ID | 5328621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C7 |
Kingdom | Archaea |
Replicon accession | NC_009637 |
Strand | - |
Start bp | 1705007 |
End bp | 1706365 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640794307 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_001330961 |
Protein GI | 150403667 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.580282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.069865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGC GAGTTATGGA GCAGGTTCGA AAGTTAAAAA GTGAAAATAT TAATAAACTC ATTTTGAGAT ACGTCATCCC CTCAATTGCA GGTACCGTCA TTATTGGAAT TTATAGCATA ATTGACGGGA TATTTATTGG AAGAACCGTC GGAGCTGAAG GTCTTGCAGG AGTAACACTC GCATTTCCAG TTTTAATTGC AATTGGATCC ATTGGAATTA TGATTGGAGC GGGTGCTTCT GCAATAATTT CAATAAGTCT TGGAAAAAAA GATTATGAAA TGGCTTCTCG CATTTTAAAA ACTGCATTTT ACTACATTAT CTTAATAAGC TTTATAATTA CATTTTTAGG ATTATTGTTT ATTGATCCAG TTATTTCAGG CCTGAATCTT ACGAAAAATT TGGAAAACTA CGTTTTGCAA TATTCAAAAA TAATAATTAT TGGGGCAATT GCACAAATTT TTGCAATATC TCTTGACCCA ATACTTCGAA ATGACGGCTT TCCAAAGAAA TCTATGATAA TACTGACTTT GATGTCAGTA TTTAACATTT TACTCGATTA CATCTTGATA GTTGTATTTA ATTTTGGAGT TATGGGGGCG GCTACTGCAA CCGTGTTTGC ACAAGCCCTT GGATCAGTTT TGTACCTAAA ACATTTTTTG CTAGGTAAAT CAAACGTAAA AATTGGAAAG AATAGTCCAT TTTCTGAATT TTCAATTATA AAACGAATTG CAAAAACCGG ATTTTCACCA TTTATTATGG AACTTGCATT TGGAATATTG ATGATAGTAC ACAATATCCA GTTTATAAGG TATGGTAGTT CCCTAGACGT TTCTGCATAC GGTATTGTAA TATATATCAC GTCATTTTTA TACATGGTGT ATTTAGGGAT TTCAGAAGGC GTTCAGCCAT TAATAAGCTA TAATTACGGG GCTAAAAAAT TTAATAGAGT TTTTGAAATA TTAAAAAAAG CAGTATTCAT TAACGCAATT CTTGGTATTT GTTCATTTTT AACAATTTTA AATTTCCCAA ATCTTTTAAT AAAGATTTTC AATCCACATG ATACGAATTT AATCGCAACA ACCACTGTCG GCCTTGAAAT ACATAATTTC GCAATTTTAA TTCTTGGAGT ATCAATGGTT TTGACGATGT ATTTTTTAGC TACAGAGCAA CCAAGGATCG CGGGTTTTTT GTCGTTAGGA AGAACTATAA TATTTATTCT TCCTGCGATC ATTGTATTTC CAATATATTT TGGAATTAAA GGGATATGGT GGGCCACAGT ATTTTCAGAG TACATGGGGC TTATATTTAC CATTTACTTC ATAGCTAAAG AGATTAAAAA GATAAAACGA AGAATTTAA
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Protein sequence | MKRRVMEQVR KLKSENINKL ILRYVIPSIA GTVIIGIYSI IDGIFIGRTV GAEGLAGVTL AFPVLIAIGS IGIMIGAGAS AIISISLGKK DYEMASRILK TAFYYIILIS FIITFLGLLF IDPVISGLNL TKNLENYVLQ YSKIIIIGAI AQIFAISLDP ILRNDGFPKK SMIILTLMSV FNILLDYILI VVFNFGVMGA ATATVFAQAL GSVLYLKHFL LGKSNVKIGK NSPFSEFSII KRIAKTGFSP FIMELAFGIL MIVHNIQFIR YGSSLDVSAY GIVIYITSFL YMVYLGISEG VQPLISYNYG AKKFNRVFEI LKKAVFINAI LGICSFLTIL NFPNLLIKIF NPHDTNLIAT TTVGLEIHNF AILILGVSMV LTMYFLATEQ PRIAGFLSLG RTIIFILPAI IVFPIYFGIK GIWWATVFSE YMGLIFTIYF IAKEIKKIKR RI
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